RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 FAM107BQ9H098 131 aa5.57□□□□□ -1.52
RTFDC1-209ENST00000487211 MUC13Q9H3R2 512 aa5.57□□□□□ -1.52
RTFDC1-209ENST00000487211 PIGUQ9H490 435 aa5.57□□□□□ -1.52
RTFDC1-209ENST00000487211 OR10H1Q9Y4A9 318 aa5.57□□□□□ -1.52
RTFDC1-209ENST00000487211 CPAMD8Q8IZJ3 1885 aa5.57□□□□□ -1.52
RTFDC1-209ENST00000487211 NINQ8N4C6 2090 aa5.57□□□□□ -1.52
RTFDC1-209ENST00000487211 EML6Q6ZMW3 1958 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 RNF103-CHMP3A0A140T963 221 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 LOC100653049A0A140TA62 436 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 A0A1W2PP18 115 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 OR6C70A6NIJ9 312 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 HSPB2A8KAH6 182 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 C17orf51A8MQB3 221 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 USP17L23D6RBM5 183 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 NPIPB11E5RHQ5 1161 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 KLRC4-KLRK1H3BQV0 150 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 GTPBP1O00178 669 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 NR5A2O00482 541 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 FBP2O00757 339 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 RFXANKO14593 260 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 TP53I11O14683 189 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 ZNHIT1O43257 154 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 FADS1O60427 444 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 FCMRO60667 390 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 HNRNPCL1O60812 293 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 ICOSLGO75144 302 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 TRIM3O75382 744 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 KRT34O76011 436 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 GLSO94925 669 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 P04436 131 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 ALOX5P09917 674 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 ZCCHC18P0CG32 403 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 OR12D1P0DN82 309 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 TFPIP10646 304 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SRD5A1P18405 259 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SOAT1P35610 550 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 TRPC1P48995 793 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 GAS1P54826 345 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 CDH12P55289 794 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 KCNK10P57789 538 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 IRX1P78414 480 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 MRPS22P82650 360 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 PLCXD2Q0VAA5 305 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 RCAN2Q14206 197 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 RBMS2Q15434 407 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 ZNHIT3Q15649 155 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 HSPB2Q16082 182 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 DECR1Q16698 335 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 OR5M10Q6IEU7 315 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 TNFAIP8L2Q6P589 184 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 DLEU7Q6UYE1 221 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SPATA21Q7Z572 469 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 RNF130Q86XS8 419 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SIAH3Q8IW03 269 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 MSRB3Q8IXL7 192 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 DND1Q8IYX4 353 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 FBXW8Q8N3Y1 598 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 NANOGP1Q8N7R0 232 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 WDSUB1Q8N9V3 476 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 TMEM116Q8NCL8 245 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 GJC3Q8NFK1 279 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 MIPOL1Q8TD10 442 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 ZFP90Q8TF47 636 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 CDS1Q92903 461 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 RAB8BQ92930 207 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 MIB2Q96AX9 1013 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 NEURL3Q96EH8 262 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 RMND5BQ96G75 393 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 AURKBQ96GD4 344 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 ITCHQ96J02 903 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 MS4A4EQ96PG1 132 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 OR7D2Q96RA2 312 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SECISBP2Q96T21 854 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 STACQ99469 402 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 FAM173AQ9BQD7 235 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC35A5Q9BS91 424 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 NMUR2Q9GZQ4 415 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 OR51I1Q9H343 314 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 GHITMQ9H3K2 345 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SCPEP1Q9HB40 452 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 DECR2Q9NUI1 292 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 GIN1Q9NXP7 522 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 TUBA8Q9NY65 449 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC25A37Q9NYZ2 338 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 CNIH4Q9P003 139 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 VAPAQ9P0L0 249 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 ARMCX1Q9P291 453 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 FAF1Q9UNN5 650 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 KLF13Q9Y2Y9 288 aaPredicted RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 LYVE1Q9Y5Y7 322 aa5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.56□□□□□ -1.52
RTFDC1-209ENST00000487211 FAM166BA8MTA8 275 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 NPIPA5E9PKD4 350 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 HMGN4O00479 90 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 HS6ST1O60243 411 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 PDE9AO76083 593 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 NDUFB8O95169 186 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 SNX4O95219 450 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 UTS2O95399 124 aa5.55□□□□□ -1.52
RTFDC1-209ENST00000487211 ANP32DO95626 131 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms