RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 SH3BGRP55822 239 aaPredicted RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 VLDLRP98155 873 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 POU3F1Q03052 451 aaPredicted RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 CHRNB3Q05901 458 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 GK3PQ14409 553 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 DAZAP2Q15038 168 aaPredicted RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 NIPAL3Q6P499 406 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 CYP2R1Q6VVX0 501 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 MBOAT2Q6ZWT7 520 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 CXorf67Q86X51 503 aaPredicted RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 ZDHHC21Q8IVQ6 265 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 ZNF775Q96BV0 537 aaPredicted RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 DHRS1Q96LJ7 313 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 ZNF385AQ96PM9 386 aaKnown RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 LINC00470Q9BZP3 86 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 MOV10Q9HCE1 1003 aaKnown RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 MEPEQ9NQ76 525 aaPredicted RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 EDARQ9UNE0 448 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 A0A1W2PRG6 482 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 CIB4A0PJX0 185 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 NPIPB13A6NJU9 1138 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 AQP12BA6NM10 295 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 NPIPB4C9JG80 1138 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 J3KTA2 159 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 hCG_2039718K7EN88 272 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 FFAR1O14842 300 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 RNF13O43567 381 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 TRAF3IP2O43734 574 aaPredicted RBP12.94□□□□□ -0.34
LIMS3-205ENST00000487150 KRT36O76013 467 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 SAGP10523 405 aaPredicted RBP12.94□□□□□ -0.34
LIMS3-205ENST00000487150 IFI30P13284 250 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 PTNP21246 168 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 ATP6V1B2P21281 511 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 CBLP22681 906 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 MPGP29372 298 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 NR1H2P55055 460 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 CLDN17P56750 224 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 SPIBQ01892 262 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 TLE4Q04727 773 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 FLOT2Q14254 428 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 CCDC121Q6ZUS5 278 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 BHLHA15Q7RTS1 189 aaPredicted RBP12.94□□□□□ -0.34
LIMS3-205ENST00000487150 SLC46A3Q7Z3Q1 461 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 PIWIL3Q7Z3Z3 882 aaKnown RBP12.94□□□□□ -0.34
LIMS3-205ENST00000487150 EPHX4Q8IUS5 362 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 AQP12AQ8IXF9 295 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 FAM86B1Q8N7N1 296 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 ZIC4Q8N9L1 334 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 PFN4Q8NHR9 129 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 HSD17B8Q92506 261 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 SLC7A6OSQ96CW6 309 aaPredicted RBP12.94□□□□□ -0.34
LIMS3-205ENST00000487150 MUCL1Q96DR8 90 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 YY1AP1Q9H869 796 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 MAN2C1Q9NTJ4 1040 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 PRSS50Q9UI38 385 aa12.94□□□□□ -0.34
LIMS3-205ENST00000487150 INTS1Q8N201 2190 aaKnown RBP12.94□□□□□ -0.34
LIMS3-205ENST00000487150 A6NNC1 897 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 ZNF726A6NNF4 738 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 EFCAB9A8MZ26 197 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 MCIDASD6RGH6 385 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 GADD45GO95257 159 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 FUT1P19526 365 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 DNAJA1P31689 397 aaKnown RBP12.93□□□□□ -0.34
LIMS3-205ENST00000487150 MAGEA2P43356 314 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 PRPS1P60891 318 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 PRKCDQ05655 676 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 LTBQ06643 244 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 FAPQ12884 760 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 TIMM23BQ5SRD1 257 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 FAM205BPQ63HN1 556 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 HIST2H2BCQ6DN03 193 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 HMBOX1Q6NT76 420 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 KLHL24Q6TFL4 600 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 TMEM200AQ86VY9 491 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 MED12LQ86YW9 2145 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 NRMQ8IXM6 262 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 GPR137CQ8N3F9 429 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 LINC00471Q8N535 108 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 LRR1Q96L50 414 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 LRMDAQ9H2I8 198 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 OBP2BQ9NPH6 170 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 RHCGQ9UBD6 479 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 SEC14L4Q9UDX3 406 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 TMCC3Q9ULS5 477 aa12.93□□□□□ -0.34
LIMS3-205ENST00000487150 MAGED1Q9Y5V3 778 aaPredicted RBP12.93□□□□□ -0.34
LIMS3-205ENST00000487150 A0A087WUU8 490 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 TCRBV5S2A0A599 114 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 CENPBD1B2RD01 187 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 LRRN3E7EW58 273 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 MS4A18H0YCH9 400 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 BLOC1S5-TXNDC5H3BN57 136 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 EBAG9O00559 213 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 ACOT8O14734 319 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 IGHV3-9P01782 118 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 RAP2AP10114 183 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 CRYGSP22914 178 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 IGHV1-2P23083 117 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 STK11Q15831 433 aa12.92□□□□□ -0.34
LIMS3-205ENST00000487150 MS4A18Q3C1V0 323 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms