RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 GTPBP8Q8N3Z3 284 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-206ENST00000487062 KLHL36Q8N4N3 616 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 ACBD7Q8N6N7 88 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 POMGNT2Q8NAT1 580 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 CYB561A3Q8NBI2 242 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 LSM14AQ8ND56 463 aaKnown RBP6.36□□□□□ -1.39
SF3A3-206ENST00000487062 ATP6V1C2Q8NEY4 427 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 BBS1Q8NFJ9 593 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 OR4F15Q8NGB8 312 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 OR51G2Q8NGK0 314 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 THAP4Q8WY91 577 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 PSMF1Q92530 271 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 PTP4A1Q93096 173 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 NTNG2Q96CW9 530 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 Q96M85 177 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 JSRP1Q96MG2 331 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-206ENST00000487062 SNX18Q96RF0 628 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 UTP23Q9BRU9 249 aaKnown RBP6.36□□□□□ -1.39
SF3A3-206ENST00000487062 OR11A1Q9GZK7 315 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 NAA50Q9GZZ1 169 aaKnown RBP6.36□□□□□ -1.39
SF3A3-206ENST00000487062 CHST11Q9NPF2 352 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 ASCL3Q9NQ33 180 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 ALKBH4Q9NXW9 302 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 HAO2Q9NYQ3 351 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 FBXL2Q9UKC9 423 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 MOKQ9UQ07 419 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 MSRB2Q9Y3D2 182 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 HDGFL3Q9Y3E1 203 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 ADAM18Q9Y3Q7 739 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 PCSK5Q92824 1860 aa6.36□□□□□ -1.39
SF3A3-206ENST00000487062 VCANP13611 3396 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 TEX13CA0A0J9YWL9 993 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 DAPL1A0PJW8 107 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 CCDC182A6NF36 153 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 A6NIZ1 184 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 NPIPB13A6NJU9 1138 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 LIPT2A6NK58 231 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 C12orf71A8MTZ7 269 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 NPIPB4C9JG80 1138 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 FTCDNL1E5RQL4 147 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 H3BML4 177 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 PLPP3O14495 311 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 EREGO14944 169 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 SEC14L5O43304 696 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 AIREO43918 545 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 SERPINI2O75830 405 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 GLCEO94923 617 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 APOL3O95236 402 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ATE1O95260 518 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 BCL10O95999 233 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 IGHMP01871 453 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 F13BP05160 661 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 SCG5P05408 212 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 SBK2P0C263 348 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ZNF17P17021 662 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 SPI1P17947 270 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 CNR1P21554 472 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 SRD5A2P31213 254 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ACVR1BP36896 505 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 TGFBR2P37173 567 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 LIPAP38571 399 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 CENPAP49450 140 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 RGS6P49758 472 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 RAP1BP61224 184 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 RPL27P61353 136 aaKnown RBP6.35□□□□□ -1.39
SF3A3-206ENST00000487062 RAP1AP62834 184 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 TLE3Q04726 772 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 PUDPQ08623 228 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 OR7A5Q15622 319 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 INPP5JQ15735 1006 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-206ENST00000487062 TSTQ16762 297 aaKnown RBP6.35□□□□□ -1.39
SF3A3-206ENST00000487062 C4orf17Q53FE4 359 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ZNF468Q5VIY5 522 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-206ENST00000487062 RAET1LQ5VY80 246 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 FAM205BPQ63HN1 556 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 SLC16A12Q6ZSM3 486 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 SHFQ7M4L6 423 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ASCL5Q7RTU5 278 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 FAM122BQ7Z309 247 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ARIH2OSQ8N7S6 290 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 NPEPL1Q8NDH3 523 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ADPRHL1Q8NDY3 354 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 OR2T4Q8NH00 348 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 OR52N1Q8NH53 320 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ZNF417Q8TAU3 575 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 POC1BQ8TC44 478 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 RASD2Q96D21 266 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 NXPE2Q96DL1 559 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 C5orf34Q96MH7 638 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 TSPAN32Q96QS1 320 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 OR5M11Q96RB7 305 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ZNF587Q96SQ5 575 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-206ENST00000487062 NMNAT3Q96T66 252 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 CNN2Q99439 309 aaKnown RBP6.35□□□□□ -1.39
SF3A3-206ENST00000487062 PIGQQ9BRB3 760 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 HCAR1Q9BXC0 346 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 NMNAT2Q9BZQ4 307 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 TXNIPQ9H3M7 391 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 PROK2Q9HC23 129 aa6.35□□□□□ -1.39
SF3A3-206ENST00000487062 ERVK13-1Q9NX77 482 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms