RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 NFAM1Q8NET5 270 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 OR2A12Q8NGT7 310 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 OR52J3Q8NH60 311 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 SPPL2AQ8TCT8 520 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 BRSK1Q8TDC3 778 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 HCAR2Q8TDS4 363 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 PIH1D2Q8WWB5 315 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 CDKL2Q92772 493 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 PEX13Q92968 403 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 LHX4Q969G2 390 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ECHDC3Q96DC8 303 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 CERS2Q96G23 380 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ATP6V1G3Q96LB4 118 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF641Q96N77 438 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 LYSMD1Q96S90 227 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 LITAFQ99732 161 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 P2RY13Q9BPV8 354 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 C19orf43Q9BQ61 176 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ZSCAN5AQ9BUG6 496 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 TM6SF2Q9BZW4 377 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 TRABDQ9H4I3 376 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 C8orf33Q9H7E9 229 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF696Q9H7X3 374 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 GORASP2Q9H8Y8 452 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 LPAR2Q9HBW0 351 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 TREX1Q9NSU2 369 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 EURLQ9NYK6 297 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 THAP10Q9P2Z0 257 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 GHRLQ9UBU3 117 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 SEC14L4Q9UDX3 406 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 SUN2Q9UH99 717 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 LGALS13Q9UHV8 139 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 B9D1Q9UPM9 204 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 RRP15Q9Y3B9 282 aaKnown RBP3.34□□□□□ -1.87
PTCD3-216ENST00000487043 PPIL1Q9Y3C6 166 aa3.34□□□□□ -1.87
PTCD3-216ENST00000487043 MIA3Q5JRA6 1907 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 A0A0J9YYE9 177 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 IQANK1A0A1B0GTG1 560 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 EME2A4GXA9 379 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 LOC730098B7Z3J9 87 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 PRSS44E7EML9 344 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SPECC1L-ADORA2AF8WAN1 911 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 H3BQF6 201 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 K7EQM0 130 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 K7EQS6 105 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 MAGEB3O15480 346 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 RGS16O15492 202 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SDC3O75056 442 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 TM7SF2O76062 418 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 KIAA0754O94854 1291 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 VAPBO95292 243 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 ANP32DO95626 131 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 TRBC1P01850 177 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SP1P08047 785 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 UQCRBP14927 111 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 UCP1P25874 307 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 HTR2AP28223 471 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SAA4P35542 130 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 HMGCLP35914 325 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SLCO1A2P46721 670 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SERPINB9P50453 376 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SLC7A2P52569 658 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 METAP1P53582 386 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 KDSRQ06136 332 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 DNAJC3Q13217 504 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 NAB1Q13506 487 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 FASTKQ14296 549 aaKnown RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 TAF1AQ15573 450 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 CDKN3Q16667 212 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 HNRNPA1L2Q32P51 320 aaKnown RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 MOGAT2Q3SYC2 334 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 TTMPQ5BVD1 217 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 C9orf64Q5T6V5 341 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 LGSNQ5TDP6 509 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 AGAP7PQ5VUJ5 663 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 WDR25Q64LD2 544 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF841Q6ZN19 808 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 GDPGP1Q6ZNW5 385 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 NET1Q7Z628 596 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 VASH2Q86V25 355 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 RALGPS2Q86X27 583 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 CCDC71Q8IV32 467 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 CTAGE3PQ8IX95 158 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SAMD12Q8N8I0 201 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 ZNRF1Q8ND25 227 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 OR52M1Q8NGK5 317 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 OR6K2Q8NGY2 324 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 PNPT1Q8TCS8 783 aaKnown RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 BLOC1S5Q8TDH9 187 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 PDCD6IPQ8WUM4 868 aaKnown RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 DCAKDQ8WVC6 231 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SLC5A11Q8WWX8 675 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 TLCD1Q96CP7 247 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 RAB3CQ96E17 227 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 MSANTD3Q96H12 275 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 MCCC1Q96RQ3 725 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF607Q96SK3 696 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 GPR174Q9BXC1 333 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 STRADBQ9C0K7 418 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 STMN4Q9H169 189 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms