RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 IFNA8P32881 189 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 MSX2P35548 267 aaPredicted RBP11.6□□□□□ -0.55
SF1-216ENST00000486867 KRTAP10-9P60411 292 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 VLDLRP98155 873 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 PMS2P3Q13401 168 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 DGCR6Q14129 220 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 TRIM25Q14258 630 aaKnown RBP11.6□□□□□ -0.55
SF1-216ENST00000486867 TRAM2Q15035 370 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 LCN8Q6JVE9 175 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 FKBP9P1Q75LS8 142 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 RNF113BQ8IZP6 322 aaKnown RBP11.6□□□□□ -0.55
SF1-216ENST00000486867 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 KDM8Q8N371 416 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 ACOT11Q8WXI4 607 aaPredicted RBP11.6□□□□□ -0.55
SF1-216ENST00000486867 KISS1RQ969F8 398 aaPredicted RBP11.6□□□□□ -0.55
SF1-216ENST00000486867 S100PBPQ96BU1 408 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 SLC7A6OSQ96CW6 309 aaPredicted RBP11.6□□□□□ -0.55
SF1-216ENST00000486867 PYURFQ96I23 114 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 NSMCE2Q96MF7 247 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 MUS81Q96NY9 551 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 FUZQ9BT04 418 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 MED18Q9BUE0 208 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 C20orf141Q9NUB4 165 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 ASB6Q9NWX5 421 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 TAS2R5Q9NYW4 299 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 MED31Q9Y3C7 131 aa11.6□□□□□ -0.55
SF1-216ENST00000486867 OTOGQ6ZRI0 2925 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 TCRBV5S2A0A599 114 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 NPIPB13A6NJU9 1138 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 NPIPB4C9JG80 1138 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 RPL36A-HNRNPH2H7BZ11 118 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 OR7A10O76100 309 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 CH25HO95992 272 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 HLA-DOBP13765 273 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 MPGP29372 298 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 SELENOPP49908 381 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 FOXG1P55316 489 aaPredicted RBP11.59□□□□□ -0.55
SF1-216ENST00000486867 RPS4XP62701 263 aaKnown RBP11.59□□□□□ -0.55
SF1-216ENST00000486867 TIMM23BQ5SRD1 257 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 PGM2L1Q6PCE3 622 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 BHLHA15Q7RTS1 189 aaPredicted RBP11.59□□□□□ -0.55
SF1-216ENST00000486867 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.59□□□□□ -0.55
SF1-216ENST00000486867 PIWIL3Q7Z3Z3 882 aaKnown RBP11.59□□□□□ -0.55
SF1-216ENST00000486867 LRRC17Q8N6Y2 441 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 PFN4Q8NHR9 129 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 HSD17B8Q92506 261 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 POP5Q969H6 163 aaKnown RBP11.59□□□□□ -0.55
SF1-216ENST00000486867 LRR1Q96L50 414 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 OR2M2Q96R28 347 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 FNDC11Q9BVV2 318 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 NMNAT1Q9HAN9 279 aaPredicted RBP11.59□□□□□ -0.55
SF1-216ENST00000486867 IL1RAPQ9NPH3 570 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 C6orf203Q9P0P8 240 aaPredicted RBP11.59□□□□□ -0.55
SF1-216ENST00000486867 CSMD2Q7Z408 3487 aa11.59□□□□□ -0.55
SF1-216ENST00000486867 A0A087WUU8 490 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 A0A1W2PPR1 153 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 OR5H1A6NKK0 313 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 ACOT8O14734 319 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 AKAP8O43823 692 aaKnown RBP11.58□□□□□ -0.56
SF1-216ENST00000486867 LYZL6O75951 148 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 IGHV3-9P01782 118 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 NQO1P15559 274 aaKnown RBP11.58□□□□□ -0.56
SF1-216ENST00000486867 ATP6V1B2P21281 511 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 CBLP22681 906 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 IL32P24001 234 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 MAGEA2P43356 314 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 CLDN17P56750 224 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 MS4A2Q01362 244 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 PRKCDQ05655 676 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 FAPQ12884 760 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 BNIP1Q12981 228 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 FHL1Q13642 323 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 TSC22D1Q15714 1073 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 TAB1Q15750 504 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 GABRA6Q16445 453 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 ANKDD1AQ495B1 522 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 DNAL1Q4LDG9 190 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 ANKRD34AQ69YU3 496 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 OR7E24Q6IFN5 339 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 LINGO2Q7L985 606 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 ABHD12BQ7Z5M8 362 aaPredicted RBP11.58□□□□□ -0.56
SF1-216ENST00000486867 CYP4Z1Q86W10 505 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 UEVLDQ8IX04 471 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 C17orf78Q8N4C9 275 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 SLC7A13Q8TCU3 470 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 ASB9Q96DX5 294 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 SGTBQ96EQ0 304 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 TMEM204Q9BSN7 226 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 PLEKHF2Q9H8W4 249 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 HIF3AQ9Y2N7 669 aa11.58□□□□□ -0.56
SF1-216ENST00000486867 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
SF1-216ENST00000486867 KPNA4O00629 521 aaPredicted RBP11.57□□□□□ -0.56
SF1-216ENST00000486867 CASKO14936 926 aa11.57□□□□□ -0.56
SF1-216ENST00000486867 H1F0P07305 194 aaKnown RBP11.57□□□□□ -0.56
SF1-216ENST00000486867 ADORA3P0DMS8 318 aa11.57□□□□□ -0.56
SF1-216ENST00000486867 ITGA2P17301 1181 aa11.57□□□□□ -0.56
SF1-216ENST00000486867 FUT1P19526 365 aa11.57□□□□□ -0.56
SF1-216ENST00000486867 YAP1P46937 504 aaKnown RBP11.57□□□□□ -0.56
SF1-216ENST00000486867 SH3BGRP55822 239 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms