RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 GK3PQ14409 553 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 CYTH1Q15438 398 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 ZNF77Q15935 545 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 NRF1Q16656 503 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 PAGE3Q5JUK9 113 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 GPR157Q5UAW9 335 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 KDM7AQ6ZMT4 941 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 PAQR7Q86WK9 346 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 CDR2LQ86X02 465 aaPredicted RBP3.18□□□□□ -1.9
SMC4-218ENST00000486711 PSTKQ8IV42 348 aaKnown RBP3.18□□□□□ -1.9
SMC4-218ENST00000486711 PNKDQ8N490 385 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 OR56B2PQ8NGI1 322 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 KCNG3Q8TAE7 436 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 FAM110BQ8TC76 370 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 RASD2Q96D21 266 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 CNDP1Q96KN2 507 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 CCDC77Q9BR77 488 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 PELOQ9BRX2 385 aaKnown RBP3.18□□□□□ -1.9
SMC4-218ENST00000486711 MFFQ9GZY8 342 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 MTRF1LQ9UGC7 380 aaKnown RBP3.18□□□□□ -1.9
SMC4-218ENST00000486711 HEATR9A2RTY3 570 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 PSMB11A5LHX3 300 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 RBMY1BA6NDE4 496 aaKnown RBP3.17□□□□□ -1.9
SMC4-218ENST00000486711 RBMY1EA6NEQ0 496 aaKnown RBP3.17□□□□□ -1.9
SMC4-218ENST00000486711 USP27XA6NNY8 438 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 TRIM49D1C9J1S8 452 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 TMEM50AO95807 157 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 C2P06681 752 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 GIPP09681 153 aaPredicted RBP3.17□□□□□ -1.9
SMC4-218ENST00000486711 RBMY1DP0C7P1 496 aaKnown RBP3.17□□□□□ -1.9
SMC4-218ENST00000486711 RBMY1A1P0DJD3 496 aaKnown RBP3.17□□□□□ -1.9
SMC4-218ENST00000486711 ICAM2P13598 275 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 CHMLP26374 656 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 GDI1P31150 447 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 NUP107P57740 925 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 IL17AQ16552 155 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 CASC10Q5T4H9 136 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 RNASEKQ6P5S7 137 aaKnown RBP3.17□□□□□ -1.9
SMC4-218ENST00000486711 ZYG11AQ6WRX3 759 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 ZNF620Q6ZNG0 422 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 DCAF4L2Q8NA75 395 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 SDR9C7Q8NEX9 313 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 SPATA4Q8NEY3 305 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 RNF139Q8WU17 664 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 ACOT11Q8WXI4 607 aaPredicted RBP3.17□□□□□ -1.9
SMC4-218ENST00000486711 RPUSD4Q96CM3 377 aaKnown RBP3.17□□□□□ -1.9
SMC4-218ENST00000486711 HSFY1Q96LI6 401 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 C12orf42Q96LP6 360 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 NRIP2Q9BQI9 281 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 HES7Q9BYE0 225 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 QPCTLQ9NXS2 382 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 NEUROG3Q9Y4Z2 214 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 SLC25A15Q9Y619 301 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 THSD7BQ9C0I4 1608 aa3.17□□□□□ -1.9
SMC4-218ENST00000486711 A0A1W2PPE3 182 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 CTAGE15A4D2H0 777 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 GOLGA8OA6NCC3 632 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 GJE1A6NN92 205 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 C12orf71A8MTZ7 269 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 GOLGA8NF8WBI6 632 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 SOX15O60248 233 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 MGRN1O60291 552 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 GAPDHP04406 335 aaKnown RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 FGF1P05230 155 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 SERPIND1P05546 499 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 UBTFL1P0CB47 393 aaPredicted RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 TCN1P20061 433 aaPredicted RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 ATP5C1P36542 298 aaKnown RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 VHLP40337 213 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 SH3BGRP55822 239 aaPredicted RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 GNB2P62879 340 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 KCNJ2P63252 427 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 PDIA2Q13087 525 aaKnown RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 TGFBIQ15582 683 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 TMEM107Q6UX40 140 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 CTAGE6Q86UF2 777 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 C20orf203Q8NBC4 194 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 OR4F6Q8NGB9 312 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 OR2G2Q8NGZ5 317 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 ARPC1AQ92747 370 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 SMARCD2Q92925 531 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 OR8B4Q96RC9 309 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 SORT1Q99523 831 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 RASL11BQ9BPW5 248 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 KCTD14Q9BQ13 255 aaPredicted RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 TMEM246Q9BRR3 403 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 RIOK2Q9BVS4 552 aaKnown RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 LY9Q9HBG7 655 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 ZFP14Q9HCL3 533 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 TM9SF3Q9HD45 589 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 EXD2Q9NVH0 621 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 PSMC3IPQ9P2W1 217 aaPredicted RBP3.16□□□□□ -1.9
SMC4-218ENST00000486711 CELA1Q9UNI1 258 aa3.16□□□□□ -1.9
SMC4-218ENST00000486711 FRMPD3Q5JV73 1810 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 ZNF716A6NP11 495 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 H0Y9J4 135 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 TPM2P07951 284 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 ZNF735P0CB33 412 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 ELK1P19419 428 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 RORAP35398 523 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms