RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 PTPN13Q12923 2485 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.42
NELFCD-209ENST00000486263 MCIDASD6RGH6 385 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 MS4A18H0YCH9 400 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 SMAD9O15198 467 aaKnown RBP12.4□□□□□ -0.42
NELFCD-209ENST00000486263 FZD7O75084 574 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 PLGP00747 810 aaPredicted RBP12.4□□□□□ -0.42
NELFCD-209ENST00000486263 F13BP05160 661 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 NOS3P29474 1203 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 UQCRC1P31930 480 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 RPS6KA3P51812 740 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 SMSP52788 366 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 RPS4XP62701 263 aaKnown RBP12.4□□□□□ -0.42
NELFCD-209ENST00000486263 H3F3AP84243 136 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 RNPS1Q15287 305 aaKnown RBP12.4□□□□□ -0.42
NELFCD-209ENST00000486263 MS4A18Q3C1V0 323 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 IZUMO2Q6UXV1 221 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 DPY19L2P2Q6ZN68 376 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 IGFN1Q86VF2 1251 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 KIF18BQ86Y91 864 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 GALNT11Q8NCW6 608 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 OR2T33Q8NG76 320 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 CYGBQ8WWM9 190 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 TACO1Q9BSH4 297 aaKnown RBP12.4□□□□□ -0.42
NELFCD-209ENST00000486263 SF3B5Q9BWJ5 86 aaKnown RBP12.4□□□□□ -0.42
NELFCD-209ENST00000486263 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.42
NELFCD-209ENST00000486263 CALHM2Q9HA72 323 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 EMC3Q9P0I2 261 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 KLHL9Q9P2J3 617 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 DOPEY2Q9Y3R5 2298 aa12.4□□□□□ -0.42
NELFCD-209ENST00000486263 ZNF407Q9C0G0 2248 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 A0A1W2PNV4 684 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 H0YJX3 145 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 GPR171O14626 319 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 CYTIPO60759 359 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 PPP1R3DO95685 299 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 SNAP29O95721 258 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 IGFBP1P08833 259 aaPredicted RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 ACVR2AP27037 513 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 HSPA13P48723 471 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 PER3P56645 1201 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 POU3F1Q03052 451 aaPredicted RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 TOP3AQ13472 1001 aaPredicted RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 GINS1Q14691 196 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 ACSF3Q4G176 576 aaPredicted RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 C1orf185Q5T7R7 199 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 SLC27A4Q6P1M0 643 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 RPTNQ6XPR3 784 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 PXKQ7Z7A4 578 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 CHERPQ8IWX8 916 aaKnown RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 DHRSXQ8N5I4 330 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 ERMAPQ96PL5 475 aaPredicted RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 KATNB1Q9BVA0 655 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 GABARAPL3Q9BY60 117 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 POLDIP3Q9BY77 421 aaKnown RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 PRRG3Q9BZD7 231 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 GRHPRQ9UBQ7 328 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 SH3BGRL2Q9UJC5 107 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 BAIAP2Q9UQB8 552 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 SPENQ96T58 3664 aaKnown RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 USP9XQ93008 2570 aaPredicted RBP12.39□□□□□ -0.43
NELFCD-209ENST00000486263 MPDZO75970 2070 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 MED12Q93074 2177 aa12.39□□□□□ -0.43
NELFCD-209ENST00000486263 SPTAN1Q13813 2472 aaKnown RBP12.38□□□□□ -0.43
NELFCD-209ENST00000486263 LOC102725191A0A1B0GVB3 256 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 CD8B2A6NJW9 211 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 ZNF814B7Z6K7 855 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 AKAP8O43823 692 aaKnown RBP12.38□□□□□ -0.43
NELFCD-209ENST00000486263 RAMP1O60894 148 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 AQP8O94778 261 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 BCL10O95999 233 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 CD14P08571 375 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 TSPAN19P0C672 248 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 KLK2P20151 261 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 GIPRP48546 466 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 DAP3P51398 398 aaKnown RBP12.38□□□□□ -0.43
NELFCD-209ENST00000486263 AQP4P55087 323 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 ERVK-25P63136 954 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 MYBPC1Q00872 1141 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 SLC17A1Q14916 467 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 PTGES3Q15185 160 aaKnown RBP12.38□□□□□ -0.43
NELFCD-209ENST00000486263 IGFBP7Q16270 282 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 EMC4Q5J8M3 183 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 TMEM201Q5SNT2 666 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 EEF1A1P5Q5VTE0 462 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 TMEM236Q5W0B7 351 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 TTC23Q5W5X9 447 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 NSUN5P2Q63ZY6 315 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 GPR139Q6DWJ6 353 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 ABLIM2Q6H8Q1 611 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 PLXDC2Q6UX71 529 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 CASP12Q6UXS9 341 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 B3GNT6Q6ZMB0 384 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 THSD4Q6ZMP0 1018 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 SLC35D2Q76EJ3 337 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 HDDC2Q7Z4H3 204 aa12.38□□□□□ -0.43
NELFCD-209ENST00000486263 DOLPP1Q86YN1 238 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms