RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 WIF1Q9Y5W5 379 aa10.83□□□□□ -0.68
PKP4-213ENST00000486254 FKBP7Q9Y680 259 aa10.83□□□□□ -0.68
PKP4-213ENST00000486254 TMEM14AQ9Y6G1 99 aa10.83□□□□□ -0.68
PKP4-213ENST00000486254 TRAV1-2A0A0B4J238 106 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 CTDSP2O14595 271 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 CASKO14936 926 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ZNF354AO60765 605 aaPredicted RBP10.82□□□□□ -0.68
PKP4-213ENST00000486254 KLF7O75840 302 aaPredicted RBP10.82□□□□□ -0.68
PKP4-213ENST00000486254 GATBO75879 557 aaKnown RBP10.82□□□□□ -0.68
PKP4-213ENST00000486254 GYPBP06028 91 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 MRPL3P09001 348 aaKnown RBP10.82□□□□□ -0.68
PKP4-213ENST00000486254 RPS5P46782 204 aaKnown RBP10.82□□□□□ -0.68
PKP4-213ENST00000486254 RPL27P61353 136 aaKnown RBP10.82□□□□□ -0.68
PKP4-213ENST00000486254 RIN1Q13671 783 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 MESTQ5EB52 335 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 LCN10Q6JVE6 187 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ZFP41Q8N8Y5 198 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 SYT14Q8NB59 555 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ZNF519Q8TB69 540 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ASB15Q8WXK1 588 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 NTNG2Q96CW9 530 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 PELI1Q96FA3 418 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 TTYH2Q9BSA4 534 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 TMED9Q9BVK6 235 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 DEFB126Q9BYW3 111 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.82□□□□□ -0.68
PKP4-213ENST00000486254 QPCTLQ9NXS2 382 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 NCDNQ9UBB6 729 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 V9GYH0 126 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 RALGAPA1Q6GYQ0 2036 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 PCNX3Q9H6A9 2034 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ANKRD33BA6NCL7 494 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 TP53I11O14683 189 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 SEC14L5O43304 696 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 UMODP07911 640 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 COX6A1P12074 109 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ZNF28P17035 718 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ADH6P28332 368 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 PYCR1P32322 319 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 PTGDSP41222 190 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 OR12D2P58182 307 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 DEFA1P59665 94 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 DEFA3P59666 94 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 SIRPAP78324 504 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 GXYLT1Q4G148 440 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 HBMQ6B0K9 141 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 MZT2AQ6P582 158 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 OPN5Q6U736 354 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 TIGD4Q8IY51 512 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 GDPD1Q8N9F7 314 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 SNX33Q8WV41 574 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 THAP4Q8WY91 577 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 RASL10BQ96S79 203 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 TBX5Q99593 518 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 DDA1Q9BW61 102 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ULBP3Q9BZM4 244 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 ADAM30Q9UKF2 790 aa10.82□□□□□ -0.68
PKP4-213ENST00000486254 SIRT4Q9Y6E7 314 aaPredicted RBP10.82□□□□□ -0.68
PKP4-213ENST00000486254 LAMA1P25391 3075 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 PRSS37A4D1T9 235 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 A6NIZ1 184 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 CENPBD1B2RD01 187 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 J3QLW9 94 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 PLPP3O14495 311 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 XKRYO14609 159 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 PFDN1O60925 122 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 ARL6IP5O75915 188 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 TACSTD2P09758 323 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 RAB40ALP0C0E4 278 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 ZNF19P17023 458 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 GRPRP30550 384 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 EIF1P41567 113 aaKnown RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 RAP1BP61224 184 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 RAP1AP62834 184 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 E2F1Q01094 437 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 EGR3Q06889 387 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 ATP1A4Q13733 1029 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 ANGPT1Q15389 498 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 ZNF239Q16600 458 aaKnown RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 PLPPR5Q32ZL2 321 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 GLYR1Q49A26 553 aaPredicted RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 STEAP3Q658P3 488 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 XKRXQ6PP77 449 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 ARL9Q6T311 187 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 SSX6Q7RTT6 188 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 CDC20BQ86Y33 519 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 FADS6Q8N9I5 356 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 OR6K6Q8NGW6 343 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 ZPLD1Q8TCW7 415 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 SLC25A43Q8WUT9 341 aaPredicted RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 THRSPQ92748 146 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 MR1Q95460 341 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 DDIT4LQ96D03 193 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 LIN37Q96GY3 246 aaPredicted RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 UBL7Q96S82 380 aaPredicted RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 DCLRE1CQ96SD1 692 aaKnown RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 SDHCQ99643 169 aaPredicted RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 KCNS3Q9BQ31 491 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 HDHD5Q9BXW7 423 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms