RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 IFNGR2P38484 337 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 AQP2P41181 271 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 CLK1P49759 484 aaKnown RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 CTBP2P56545 445 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 RAC3P60763 192 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 RASGEF1BQ0VAM2 473 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 TOP3AQ13472 1001 aaPredicted RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 C1DQ13901 141 aaKnown RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 DGCR6Q14129 220 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 MELKQ14680 651 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 RCN1Q15293 331 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 SF3B4Q15427 424 aaKnown RBP eCLIP5.02□□□□□ -1.61
COPS3-208ENST00000486032 ATP6AP1Q15904 470 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 ZNF74Q16587 644 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 ZNF239Q16600 458 aaKnown RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 FAM69AQ5T7M9 428 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 EEF1A1P5Q5VTE0 462 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 RTL6Q6ICC9 239 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 PGBD2Q6P3X8 592 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 C5orf46Q6UWT4 87 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 MAMDC2Q7Z304 686 aaPredicted RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 SLC46A3Q7Z3Q1 461 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 OAFQ86UD1 273 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 STK32CQ86UX6 486 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 CCDC71Q8IV32 467 aaPredicted RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 ATG16L2Q8NAA4 619 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 AQP11Q8NBQ7 271 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 OR4C15Q8NGM1 316 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 OR13C2Q8NGS9 318 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 OR5K1Q8NHB7 308 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 MFSD8Q8NHS3 518 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 ZPLD1Q8TCW7 415 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 ABHD3Q8WU67 409 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 SDCCAG3Q96C92 435 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 DUS3LQ96G46 650 aaKnown RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 ADGRG7Q96K78 797 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 BDH2Q9BUT1 245 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 ANKRD19PQ9H560 264 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 C12orf49Q9H741 205 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 SMURF2Q9HAU4 748 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 CHST11Q9NPF2 352 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 PAQR5Q9NXK6 330 aaPredicted RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 IL20RAQ9UHF4 553 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 TMEM5Q9Y2B1 443 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 ZNF835Q9Y2P0 537 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 RRP15Q9Y3B9 282 aaKnown RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 FAM215AQ9Y5M1 114 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 NBASA2RRP1 2371 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 MYO18BQ8IUG5 2567 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 UTP20O75691 2785 aaKnown RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 UNC119BA6NIH7 251 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 AQP7P3A6NL99 342 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 FTCDNL1E5RQL4 147 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 G3V2T6 193 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 H3BN98 237 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 CDC42EP2O14613 210 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 LRRTM2O43300 516 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 EIF1BO60739 113 aaKnown RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 SMNDC1O75940 238 aaKnown RBP eCLIP5.01□□□□□ -1.61
COPS3-208ENST00000486032 SOX14O95416 240 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 MT-ATP6P00846 226 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 RNASE1P07998 156 aaKnown RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 IGFBP1P08833 259 aaPredicted RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 TMIGD3P0DMS9 266 aaPredicted RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 GLI4P10075 376 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 HLA-DOBP13765 273 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 ANPEPP15144 967 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 ZNF43P17038 809 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 HOXB6P17509 224 aaKnown RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 ADMP35318 185 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 RPL4P36578 427 aaKnown RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 CA7P43166 264 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 OMPP47874 163 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 SLC9A3P48764 834 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 MAP2K6P52564 334 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 CLDN17P56750 224 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 CTXN1P60606 82 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 POU3F1Q03052 451 aaPredicted RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 PRKCDQ05655 676 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 FOXF2Q12947 444 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 TRIP10Q15642 601 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 LRRC36Q1X8D7 754 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 MICAQ29983 383 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 TMEM201Q5SNT2 666 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 CARD17Q5XLA6 110 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 NSUN5P2Q63ZY6 315 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 LPCAT4Q643R3 524 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 GTF2IRD2BQ6EKJ0 949 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 TMEM211Q6ICI0 200 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 NIPAL3Q6P499 406 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 PAQR6Q6TCH4 344 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 Q6ZPB1 254 aaPredicted RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 SEM1Q6ZVN7 128 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 H1FNTQ75WM6 255 aaPredicted RBP5.01□□□□□ -1.61
COPS3-208ENST00000486032 ZER1Q7Z7L7 766 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 GALNT5Q7Z7M9 940 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 GTF2IRD2Q86UP8 949 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 HIPK1Q86Z02 1210 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 UEVLDQ8IX04 471 aa5.01□□□□□ -1.61
COPS3-208ENST00000486032 TUSC5Q8IXB3 177 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms