RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	PAMR1	Q6UXH9	720 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	UTS2B	Q765I0	119 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	H2BFWT	Q7Z2G1	175 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	PAQR7	Q86WK9	346 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	TRIM69	Q86WT6	500 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	ZBED8	Q8IZ13	594 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	TCTEX1D2	Q8WW35	142 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	ITFG2	Q969R8	447 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	UBE2E3	Q969T4	207 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	SIGLEC12	Q96PQ1	595 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	IL4I1	Q96RQ9	567 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	ZNF670	Q9BS34	389 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	NUP58	Q9BVL2	599 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	RAB34	Q9BZG1	259 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	SLC2A8	Q9NY64	477 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	SPRR3	Q9UBC9	169 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	ANGPTL2	Q9UKU9	493 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	PDE10A	Q9Y233	779 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	CAB39	Q9Y376	341 aa	Predicted RBP	4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	N6AMT1	Q9Y5N5	214 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	ADAMTSL1	Q8N6G6	1762 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	RALGAPA1	Q6GYQ0	2036 aa		4.96	□□□□□ -1.62
UBR3-210	ENST00000484596	HTT	P42858	3142 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	MKI67	P46013	3256 aa	Known RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	PLEKHG2	Q9H7P9	1386 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	SULT2B1	O00204	365 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	HAS3	O00219	553 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	OR10H3	O60404	316 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	PFKFB2	O60825	505 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	GPX5	O75715	221 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	RNH1	P13489	461 aa	Known RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	ETS2	P15036	469 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	NMT1	P30419	496 aa	Known RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	HLCS	P50747	726 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	DAP3	P51398	398 aa	Known RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	CCDC65	Q8IXS2	484 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	OR2L13	Q8N349	312 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	CATSPER1	Q8NEC5	780 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	KCNG3	Q8TAE7	436 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	MRAP	Q8TCY5	172 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	ST8SIA1	Q92185	356 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	MS4A14	Q96JA4	679 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	SERAC1	Q96JX3	654 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	CLCC1	Q96S66	551 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	PAIP2	Q9BPZ3	127 aa	Known RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	SLITRK2	Q9H156	845 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	NCOR1P1	Q9H4R4	102 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	WARS2	Q9UGM6	360 aa	Known RBP	4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	PHF11	Q9UIL8	331 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	TP53TG3	Q9ULZ0	132 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	ERVW-1	Q9UQF0	538 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	PPIAL4A	Q9Y536	164 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	SLX4	Q8IY92	1834 aa		4.95	□□□□□ -1.62
UBR3-210	ENST00000484596	LAMB2	P55268	1798 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	KDM3B	Q7LBC6	1761 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	PPIAL4E	A0A075B759	164 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	TRDC	B7Z8K6	153 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	KIF2A	O00139	706 aa	Predicted RBP	4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	DUSP14	O95147	198 aa	Known RBP	4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	GNA14	O95837	355 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	AGT	P01019	485 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	PPIAL4F	P0DN26	164 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	GCFC2	P16383	781 aa	Known RBP	4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	GAL	P22466	123 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	ADORA2B	P29275	332 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	EPHX2	P34913	555 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	LEP	P41159	167 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	QARS	P47897	775 aa	Known RBP	4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	RIPK4	P57078	832 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	RPL32	P62910	135 aa	Known RBP	4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	MRPS11	P82912	194 aa	Known RBP	4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	CD47	Q08722	323 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	SERTAD2	Q14140	314 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	CGB2	Q6NT52	195 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	CCDC137	Q6PK04	289 aa	Known RBP	4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	OR6C4	Q8NGE1	309 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	CCDC26	Q8TAB7	109 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	MCHR1	Q99705	422 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	PAXX	Q9BUH6	204 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	SLC7A5P2	Q9GIP4	190 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	AZI2	Q9H6S1	392 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	B3GNT2	Q9NY97	397 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	BFAR	Q9NZS9	450 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	PISD	Q9UG56	409 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	VSIG4	Q9Y279	399 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	CA5B	Q9Y2D0	317 aa		4.94	□□□□□ -1.62
UBR3-210	ENST00000484596	CARMIL3	Q8ND23	1372 aa		4.93	□□□□□ -1.62
UBR3-210	ENST00000484596	NUP98	P52948	1817 aa		4.93	□□□□□ -1.62
UBR3-210	ENST00000484596		A0A1W2PQ72	361 aa		4.93	□□□□□ -1.62
UBR3-210	ENST00000484596	VSTM2B	A6NLU5	285 aa		4.93	□□□□□ -1.62
UBR3-210	ENST00000484596		K7ENP7	123 aa		4.93	□□□□□ -1.62
UBR3-210	ENST00000484596		M0QX08	132 aa		4.93	□□□□□ -1.62
UBR3-210	ENST00000484596	LAT	O43561	262 aa		4.93	□□□□□ -1.62
UBR3-210	ENST00000484596	HCN1	O60741	890 aa		4.93	□□□□□ -1.62
UBR3-210	ENST00000484596	UPK3A	O75631	287 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms