RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 UEVLDQ8IX04 471 aa14.01□□□□□ -0.17
UPF3A-208ENST00000484246 RNF113BQ8IZP6 322 aaKnown RBP14.01□□□□□ -0.17
UPF3A-208ENST00000484246 TMEM123Q8N131 208 aa14.01□□□□□ -0.17
UPF3A-208ENST00000484246 C10orf53Q8N6V4 93 aa14.01□□□□□ -0.17
UPF3A-208ENST00000484246 ZNF433Q8N7K0 673 aaPredicted RBP14.01□□□□□ -0.17
UPF3A-208ENST00000484246 PFN4Q8NHR9 129 aa14.01□□□□□ -0.17
UPF3A-208ENST00000484246 S100PBPQ96BU1 408 aa14.01□□□□□ -0.17
UPF3A-208ENST00000484246 SGTBQ96EQ0 304 aa14.01□□□□□ -0.17
UPF3A-208ENST00000484246 LURAP1Q96LR2 239 aa14.01□□□□□ -0.17
UPF3A-208ENST00000484246 NMNAT1Q9HAN9 279 aaPredicted RBP14.01□□□□□ -0.17
UPF3A-208ENST00000484246 NPIPB13A6NJU9 1138 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 NPIPB4C9JG80 1138 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 CASKO14936 926 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 ITGA5P08648 1049 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 ITGA2P17301 1181 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 ATP6V1B2P21281 511 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 FUT4P22083 530 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 CBLP22681 906 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 MPGP29372 298 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 MSX2P35548 267 aaPredicted RBP14□□□□□ -0.17
UPF3A-208ENST00000484246 SELENOPP49908 381 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 BNIP1Q12981 228 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 C1DQ13901 141 aaKnown RBP14□□□□□ -0.17
UPF3A-208ENST00000484246 TRIM25Q14258 630 aaKnown RBP14□□□□□ -0.17
UPF3A-208ENST00000484246 TIMM23BQ5SRD1 257 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 SEZ6L2Q6UXD5 910 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 C22orf34Q6ZV56 151 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 ABHD12BQ7Z5M8 362 aaPredicted RBP14□□□□□ -0.17
UPF3A-208ENST00000484246 KDM8Q8N371 416 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 C17orf78Q8N4C9 275 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 HSD17B8Q92506 261 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 SLC7A6OSQ96CW6 309 aaPredicted RBP14□□□□□ -0.17
UPF3A-208ENST00000484246 ASB9Q96DX5 294 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 IL1RAPQ9NPH3 570 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 C20orf141Q9NUB4 165 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 TAS2R5Q9NYW4 299 aa14□□□□□ -0.17
UPF3A-208ENST00000484246 CELSR2Q9HCU4 2923 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 A0A087WUU8 490 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 TCRBV5S2A0A599 114 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 OR5H1A6NKK0 313 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 RPL36A-HNRNPH2H7BZ11 118 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 SIAH2O43255 324 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 LYZL6O75951 148 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 IGHV3-9P01782 118 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 H1F0P07305 194 aaKnown RBP13.99□□□□□ -0.17
UPF3A-208ENST00000484246 LOXP28300 417 aaPredicted RBP13.99□□□□□ -0.17
UPF3A-208ENST00000484246 MAGEA2P43356 314 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 YAP1P46937 504 aaKnown RBP13.99□□□□□ -0.17
UPF3A-208ENST00000484246 CLDN17P56750 224 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 RPS4XP62701 263 aaKnown RBP13.99□□□□□ -0.17
UPF3A-208ENST00000484246 POU3F1Q03052 451 aaPredicted RBP13.99□□□□□ -0.17
UPF3A-208ENST00000484246 TGFBR3Q03167 851 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 FAPQ12884 760 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 ANKDD1AQ495B1 522 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 OR7E24Q6IFN5 339 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 NIPAL3Q6P499 406 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 MBOAT2Q6ZWT7 520 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 PIWIL3Q7Z3Z3 882 aaKnown RBP13.99□□□□□ -0.17
UPF3A-208ENST00000484246 NANOGNBQ7Z5D8 188 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 UBE2J2Q8N2K1 259 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 LRRC17Q8N6Y2 441 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 LRR1Q96L50 414 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 MUS81Q96NY9 551 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 HS3ST6Q96QI5 342 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 OR2M2Q96R28 347 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 PIP5K1AQ99755 562 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 FUZQ9BT04 418 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 CLEC4MQ9H2X3 399 aaPredicted RBP13.99□□□□□ -0.17
UPF3A-208ENST00000484246 MAGIXQ9H6Y5 334 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 UPB1Q9UBR1 384 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 HIF3AQ9Y2N7 669 aa13.99□□□□□ -0.17
UPF3A-208ENST00000484246 FAM32AQ9Y421 112 aaKnown RBP13.99□□□□□ -0.17
UPF3A-208ENST00000484246 SLC43A1O75387 559 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 PDE5AO76074 875 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 OR6A2O95222 327 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 HIST1H2ABP04908 130 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 ADORA3P0DMS8 318 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 HLA-DOBP13765 273 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 FUT1P19526 365 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 SH3BGRP55822 239 aaPredicted RBP13.98□□□□□ -0.17
UPF3A-208ENST00000484246 KRTAP10-9P60411 292 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 PRKCDQ05655 676 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 TRAP1Q12931 704 aaKnown RBP13.98□□□□□ -0.17
UPF3A-208ENST00000484246 TAB1Q15750 504 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 STK11Q15831 433 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 GABRA6Q16445 453 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 BEX5Q5H9J7 111 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 ANKRD34AQ69YU3 496 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 PGM2L1Q6PCE3 622 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 HIST3H2AQ7L7L0 130 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 TMEM200AQ86VY9 491 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 DHFR2Q86XF0 187 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 NRMQ8IXM6 262 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 SLC7A13Q8TCU3 470 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 HIST1H2ACQ93077 130 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 MCUR1Q96AQ8 359 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 BPIFA2Q96DR5 249 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 ADAD1Q96M93 576 aaKnown RBP13.98□□□□□ -0.17
UPF3A-208ENST00000484246 RHCGQ9UBD6 479 aa13.98□□□□□ -0.17
UPF3A-208ENST00000484246 TMEM5Q9Y2B1 443 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms