RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RAB40BQ12829 278 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 CDSNQ15517 529 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 MED22Q15528 200 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 C3AR1Q16581 482 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 SYT14P1Q58G82 188 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 SLC30A6Q6NXT4 461 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 WDR88Q6ZMY6 472 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 MEX3DQ86XN8 651 aaKnown RBP6.27□□□□□ -1.41
BRCA1-216ENST00000484087 GID4Q8IVV7 300 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 SIAH3Q8IW03 269 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 RPRMLQ8N4K4 120 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 GATSQ8NAP1 163 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 TMEM178AQ8NBL3 297 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 FAM71CQ8NEG0 241 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 OR10G3Q8NGC4 313 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 OR8D4Q8NGM9 314 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 OR8K3Q8NH51 312 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 PFN4Q8NHR9 129 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 TMCO6Q96DC7 493 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 ITPKCQ96DU7 683 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF582Q96NG8 517 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-216ENST00000484087 SIGLEC11Q96RL6 698 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 RHNO1Q9BSD3 238 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 DCUN1D5Q9BTE7 237 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF426Q9BUY5 554 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 IFT27Q9BW83 186 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 DEFB127Q9H1M4 99 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 FN3KQ9H479 309 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 C12orf10Q9HB07 376 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 FLRT3Q9NZU0 649 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 CARD8Q9Y2G2 431 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 EXOSC1Q9Y3B2 195 aaKnown RBP6.27□□□□□ -1.41
BRCA1-216ENST00000484087 PCNX1Q96RV3 2341 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 DNAJC13O75165 2243 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 DOPEY1Q5JWR5 2465 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 RIIAD1A6NNX1 92 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 KDM4EB2RXH2 506 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ALG1L2C9J202 215 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 PRR23D1E9PI22 279 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 EIF1AYO14602 144 aaKnown RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 CDC42EP2O14613 210 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 TFECO14948 347 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 HCRTR2O43614 444 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ICOSLGO75144 302 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 GABARAPO95166 117 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 NDUFB2O95178 105 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ATE1O95260 518 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 NUDT14O95848 222 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 CH25HO95992 272 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 IGF2P01344 180 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 LCKP06239 509 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 RFPL3SP0C7P2 107 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 HSMCR30P0CW71 290 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 PRR23D2P0DMB1 279 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF3P17036 446 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 NAGAP17050 411 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 HK1P19367 917 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 SLC1A3P43003 542 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 MTNR1AP48039 350 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 PLAURQ03405 335 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 TMED1Q13445 227 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 CBFBQ13951 182 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 NDUFAF6Q330K2 333 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ARMCX4Q5H9R4 360 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ARMC4Q5T2S8 1044 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 FNDC7Q5VTL7 733 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 RNLSQ5VYX0 342 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 NXNL2Q5VZ03 156 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ARHGAP11AQ6P4F7 1023 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 LINC00114Q6XXX2 140 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ARMC10Q8N2F6 343 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 LNX2Q8N448 690 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 C10orf53Q8N6V4 93 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 PROKR2Q8NFJ6 384 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 OR2M7Q8NG81 312 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 OR13C2Q8NGS9 318 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 OR4Q3Q8NH05 313 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 OR51A7Q8NH64 312 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 SLC22A8Q8TCC7 542 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 SSC4DQ8WTU2 575 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 OTULINQ96BN8 352 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 C3orf49Q96BT1 292 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 YIPF6Q96EC8 236 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 RNFT2Q96EX2 444 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 GPR137Q96N19 417 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 PSMG3-AS1Q96PY0 264 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 TMEM43Q9BTV4 400 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 NAA50Q9GZZ1 169 aaKnown RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 UBQLN3Q9H347 655 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 PROK2Q9HC23 129 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 MEPEQ9NQ76 525 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 C20orf141Q9NUB4 165 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 MRPS18AQ9NVS2 196 aaKnown RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ICAM5Q9UMF0 924 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 DIMT1Q9UNQ2 313 aaKnown RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 SIGLEC7Q9Y286 467 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 YARS2Q9Y2Z4 477 aaKnown RBP6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF337Q9Y3M9 751 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 NPFFR2Q9Y5X5 522 aa6.26□□□□□ -1.41
BRCA1-216ENST00000484087 ADGRG4Q8IZF6 3080 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms