RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 KRR1Q13601 381 aaKnown RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 MESTQ5EB52 335 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 LCN1P1Q5VSP4 162 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 SLC6A19Q695T7 634 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 TIGD3Q6B0B8 471 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 LEG1Q6P5S2 330 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 ZNF322Q6U7Q0 402 aaPredicted RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 ARIH2OSQ8N7S6 290 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 POMGNT2Q8NAT1 580 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 ZNF417Q8TAU3 575 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 NDNFQ8TB73 568 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 SMPDL3BQ92485 455 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 ZNF587Q96SQ5 575 aaPredicted RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 TXNIPQ9H3M7 391 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 TIMMDC1Q9NPL8 285 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 MOKQ9UQ07 419 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 NPIPB13A6NJU9 1138 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 LIPT2A6NK58 231 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 SHISA8B8ZZ34 492 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 NPIPB4C9JG80 1138 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 OR2T7P0C7T2 308 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 CEACAM1P13688 526 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 DSCR4P56555 118 aaPredicted RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 RPL27P61353 136 aaKnown RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 TUBA1BP68363 451 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 BDH1Q02338 343 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 ZNF85Q03923 595 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 ZNF239Q16600 458 aaKnown RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 DCAF10Q5QP82 559 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 NHLRC1Q6VVB1 395 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 TUBA1AQ71U36 451 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 H1FNTQ75WM6 255 aaPredicted RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 MDGA2Q7Z553 956 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 JAZF1Q86VZ6 243 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 MARCH9Q86YJ5 346 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 GTPBP8Q8N3Z3 284 aaPredicted RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 OR1J4Q8NGS1 313 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 OR2T27Q8NH04 317 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 TBC1D15Q8TC07 691 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 SPRYD4Q8WW59 207 aaPredicted RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 THOC3Q96J01 351 aaKnown RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 ASCL3Q9NQ33 180 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 NOX1Q9Y5S8 564 aa12.65□□□□□ -0.38
CLK3-204ENST00000483723 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.38
CLK3-204ENST00000483723 WDR87Q6ZQQ6 2873 aa12.65□□□□□ -0.39
CLK3-204ENST00000483723 DAPL1A0PJW8 107 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 ZIC3O60481 467 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 CBR3O75828 277 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 OR6A2O95222 327 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 LALBAP00709 142 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 TFP02787 698 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 PSMA1P25786 263 aaKnown RBP12.64□□□□□ -0.39
CLK3-204ENST00000483723 RBMS1P29558 406 aaKnown RBP12.64□□□□□ -0.39
CLK3-204ENST00000483723 SLC16A1P53985 500 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 ACTC1P68032 377 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 ACTA1P68133 377 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 FOXK1P85037 733 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 ROR2Q01974 943 aaKnown RBP12.64□□□□□ -0.39
CLK3-204ENST00000483723 GPR50Q13585 617 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 GLYR1Q49A26 553 aaPredicted RBP12.64□□□□□ -0.39
CLK3-204ENST00000483723 C3orf33Q6P1S2 294 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 TMPRSS11AQ6ZMR5 421 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 ADPRHL1Q8NDY3 354 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 SLC25A43Q8WUT9 341 aaPredicted RBP12.64□□□□□ -0.39
CLK3-204ENST00000483723 ADAMTS14Q8WXS8 1223 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 ZMYND19Q96E35 227 aaPredicted RBP12.64□□□□□ -0.39
CLK3-204ENST00000483723 ZHX1-C8orf76Q96EF9 292 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 DNAJA3Q96EY1 480 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 CENPOQ9BU64 300 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 ALG8Q9BVK2 526 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 CHST11Q9NPF2 352 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 BABAM2Q9NXR7 383 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 ALKBH4Q9NXW9 302 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 STMN3Q9NZ72 180 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 STUB1Q9UNE7 303 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 B3GALT5Q9Y2C3 310 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 PCDHGB7Q9Y5F8 929 aa12.64□□□□□ -0.39
CLK3-204ENST00000483723 C11orf98E9PRG8 122 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 CDK2AP1O14519 115 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 RNF13O43567 381 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 DPP4P27487 766 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 TGFBR1P36897 503 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 AIMP2Q13155 320 aaKnown RBP12.63□□□□□ -0.39
CLK3-204ENST00000483723 SELENBP1Q13228 472 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 OR7A5Q15622 319 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 ACKR1Q16570 336 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 SOWAHCQ53LP3 525 aaPredicted RBP12.63□□□□□ -0.39
CLK3-204ENST00000483723 EEF1A1P5Q5VTE0 462 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 LIPKQ5VXJ0 399 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 USP43Q70EL4 1123 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 ADCK1Q86TW2 530 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 BEST3Q8N1M1 668 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 IL22RA1Q8N6P7 574 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 OR10H4Q8NGA5 316 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 GNRHR2Q96P88 292 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 CNN2Q99439 309 aaKnown RBP12.63□□□□□ -0.39
CLK3-204ENST00000483723 CHCHD6Q9BRQ6 235 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 ALG12Q9BV10 488 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms