RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 UPK3BL1B0FP48 263 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 UPK3BL2E5RIL1 263 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 MANBAO00462 879 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 MAN2B1O00754 1011 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 TGOLN2O43493 480 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 MBPP02686 304 aaPredicted RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 SLC25A4P12235 298 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ADCYAP1R1P41586 468 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 GPR15P49685 360 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 STC1P52823 247 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 SP3Q02447 781 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 PRRT3Q5FWE3 981 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ADNP2Q6IQ32 1131 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 CLEC20AQ6ZU45 233 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 SIDT2Q8NBJ9 832 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 PPCDCQ96CD2 204 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 OR2M4Q96R27 311 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 CNN2Q99439 309 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 URM1Q9BTM9 101 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 WRAP53Q9BUR4 548 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ELOVL2Q9NXB9 296 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 HDGFL3Q9Y3E1 203 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 MMP24Q9Y5R2 645 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 PRICKLE3O43900 615 aaPredicted RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 MAFKO60675 156 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ADAP1O75689 374 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 PCCBP05166 539 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ASGR2P07307 311 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 SERPINF1P36955 418 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 GIPRP48546 466 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 SRSF11Q05519 484 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF234Q14588 700 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 IHHQ14623 411 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 GGNBP1Q5YKI7 109 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF529Q6P280 563 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF322Q6U7Q0 402 aaPredicted RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 MPZL3Q6UWV2 235 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 SZRD1Q7Z422 152 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 UBE3DQ7Z6J8 389 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF573Q86YE8 665 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 GID4Q8IVV7 300 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 BAP18Q8IXM2 172 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 NKAPQ8N5F7 415 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 OR4E2Q8NGC2 313 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 M1APQ8TC57 530 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 BRIX1Q8TDN6 353 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 HPSE2Q8WWQ2 592 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 RSC1A1Q92681 617 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 EXTL1Q92935 676 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 WNT8BQ93098 351 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ADGRG7Q96K78 797 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 FAAP24Q9BTP7 215 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 CHST11Q9NPF2 352 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 FBXW2Q9UKT8 454 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 KIAA1671Q9BY89 1806 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 PDCD11Q14690 1871 aaKnown RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 NYNRINQ9P2P1 1898 aaKnown RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 IRGMA1A4Y4 181 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 TMEM235A6NFC5 223 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 F8VVB4 439 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 F8VWA3 439 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 PRAMEF26H0Y7S4 382 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 J3QW42 95 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 SMAD9O15198 467 aaKnown RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 TSPAN2O60636 221 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 FBXO24O75426 580 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 PPP1R3DO95685 299 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 C8GP07360 202 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF286BP0CG31 522 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 HKR1P10072 659 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 LPOP22079 712 aaPredicted RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 CCR1P32246 355 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 ACVRL1P37023 503 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 GDF5P43026 501 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 SLC6A11P48066 632 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 RPS23P62266 143 aaKnown RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 FAM110CQ1W6H9 321 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 COX20Q5RI15 118 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 ARMC12Q5T9G4 340 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF697Q5TEC3 545 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 DRAM2Q6UX65 266 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 LINGO4Q6UY18 593 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 MICU1Q9BPX6 476 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 DNAJC4Q9NNZ3 241 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 TRPC4Q9UBN4 977 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 FBXO7Q9Y3I1 522 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 ARL5AQ9Y689 179 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 COL11A1P12107 1806 aaPredicted RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 MTCL1Q9Y4B5 1905 aaKnown RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 SYNDIG1LA6NDD5 238 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 REM1O75628 298 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 SELEP16581 610 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 ARF4P18085 180 aaPredicted RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 ELAVL4P26378 380 aaKnown RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 HTR2CP28335 458 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 PTH2RP49190 550 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 RPL34P49207 117 aaKnown RBP7.18□□□□□ -1.26
COL4A5-205ENST00000483338 TTPAP49638 278 aa7.18□□□□□ -1.26
COL4A5-205ENST00000483338 SUCLG1P53597 346 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms