RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 ATG16L1Q676U5 607 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 ZNF836Q6ZNA1 936 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 C1orf229Q6ZS94 237 aaPredicted RBP11.02□□□□□ -0.65
TMEM54-206ENST00000482771 USP43Q70EL4 1123 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 CLIP4Q8N3C7 705 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 OR51F2Q8NH61 342 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 MFSD8Q8NHS3 518 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 PNPT1Q8TCS8 783 aaKnown RBP11.02□□□□□ -0.65
TMEM54-206ENST00000482771 STK35Q8TDR2 534 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 MS4A3Q96HJ5 214 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 CCDC115Q96NT0 180 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 OXGR1Q96P68 337 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 SYT3Q9BQG1 590 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 RBM4Q9BWF3 364 aaKnown RBP11.02□□□□□ -0.65
TMEM54-206ENST00000482771 BTNL2Q9UIR0 455 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 USP22Q9UPT9 525 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 LOC105371242A0A075B767 164 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 FTCDNL1E5RQL4 147 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 M0R3G1 203 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 SEC14L2O76054 403 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 AHSA1O95433 338 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 HLA-HP01893 362 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 TFP02787 698 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 CD79AP11912 226 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 CDKN2CP42773 168 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 RPS5P46782 204 aaKnown RBP11.01□□□□□ -0.65
TMEM54-206ENST00000482771 NME5P56597 212 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 MAPK11Q15759 364 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 ZNF311Q5JNZ3 666 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 LRP11Q86VZ4 500 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 NUDCD3Q8IVD9 361 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 TRIML2Q8N7C3 387 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 YIPF5Q969M3 257 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 TEX37Q96LM6 180 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 ZIM3Q96PE6 472 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 PANX1Q96RD7 426 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 JMJD8Q96S16 334 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 ZNF275Q9NSD4 429 aaPredicted RBP11.01□□□□□ -0.65
TMEM54-206ENST00000482771 B3GNT2Q9NY97 397 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 SEC14L4Q9UDX3 406 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 FZR1Q9UM11 496 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 ZNF232Q9UNY5 417 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 RCE1Q9Y256 329 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 NOX1Q9Y5S8 564 aa11.01□□□□□ -0.65
TMEM54-206ENST00000482771 A0A096LPI6 279 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 TRAV20A0A0B4J274 112 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 WDR91A4D1P6 747 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 ZNF99A8MXY4 864 aaPredicted RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 E9PBE3 544 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 NAT2P11245 290 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 ZNF35P13682 527 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 ANPEPP15144 967 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 GTF2E2P29084 291 aaKnown RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 GLRXP35754 106 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 ARFIP2P53365 341 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 CLNS1AP54105 237 aaKnown RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 AQP5P55064 265 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 UFM1P61960 85 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 TXNL4AP83876 142 aaKnown RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 MYBPC1Q00872 1141 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 EGR4Q05215 589 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 MAD2L1BPQ15013 274 aaPredicted RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 DPY19L1Q2PZI1 675 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 TRMT5Q32P41 509 aaKnown RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 LIN52Q52LA3 116 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 AWAT1Q58HT5 328 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 PHYHD1Q5SRE7 291 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 GKAP1Q5VSY0 366 aaPredicted RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 LRRC34Q8IZ02 419 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 RIBC1Q8N443 379 aaPredicted RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 ZNF781Q8N8C0 355 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 PIK3C3Q8NEB9 887 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 KTI12Q96EK9 354 aaPredicted RBP11□□□□□ -0.65
TMEM54-206ENST00000482771 OR52E6Q96RD3 313 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 PTDSS2Q9BVG9 487 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 B3GAT1Q9P2W7 334 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 DUSP13Q9UII6 198 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 TRRAPQ9Y4A5 3859 aa11□□□□□ -0.65
TMEM54-206ENST00000482771 PNPP00491 289 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 MYZAPP0CAP1 466 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 LBPP18428 481 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 LIMS1P48059 325 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 HOXC5Q00444 222 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 LARS2Q15031 903 aaKnown RBP10.99□□□□□ -0.65
TMEM54-206ENST00000482771 CHI3L2Q15782 390 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 GSG1Q2KHT4 349 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 CARD17Q5XLA6 110 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 REP15Q6BDI9 236 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 ACSM5Q6NUN0 579 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 SERPINA11Q86U17 422 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 TEX29Q8N6K0 151 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 TAAR8Q969N4 342 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 OR2M2Q96R28 347 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 TMEM109Q9BVC6 243 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 ROPN1BQ9BZX4 212 aaPredicted RBP10.99□□□□□ -0.65
TMEM54-206ENST00000482771 ROPN1Q9HAT0 212 aaPredicted RBP10.99□□□□□ -0.65
TMEM54-206ENST00000482771 SLC52A3Q9NQ40 469 aa10.99□□□□□ -0.65
TMEM54-206ENST00000482771 MYEF2Q9P2K5 600 aaKnown RBP10.99□□□□□ -0.65
TMEM54-206ENST00000482771 ZNF443Q9Y2A4 671 aaPredicted RBP10.99□□□□□ -0.65
TMEM54-206ENST00000482771 CHST2Q9Y4C5 530 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms