RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 NKAIN4Q8IVV8 208 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 FAM156AQ8NDB6 213 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 TMEM239Q8WW34 195 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 PLPPR2Q96GM1 343 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 PRRC1Q96M27 445 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 MUS81Q96NY9 551 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 AMBRA1Q9C0C7 1298 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 LIME1Q9H400 295 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 ESRP2Q9H6T0 727 aaKnown RBP16.19■□□□□ 0.18
SMIM4-204ENST00000482728 PLEKHF2Q9H8W4 249 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 ST6GALNAC2Q9UJ37 374 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 MED31Q9Y3C7 131 aa16.19■□□□□ 0.18
SMIM4-204ENST00000482728 CADP27708 2225 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 ZNF726A6NNF4 738 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 SLC43A1O75387 559 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 SERPINI2O75830 405 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 MT-ND1P03886 318 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 ITGA5P08648 1049 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 CDH2P19022 906 aaPredicted RBP16.18■□□□□ 0.18
SMIM4-204ENST00000482728 FOXG1P55316 489 aaPredicted RBP16.18■□□□□ 0.18
SMIM4-204ENST00000482728 POU3F1Q03052 451 aaPredicted RBP16.18■□□□□ 0.18
SMIM4-204ENST00000482728 GABRA6Q16445 453 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 SPATS1Q496A3 300 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 PXKQ7Z7A4 578 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 CYP4Z1Q86W10 505 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 GPR137CQ8N3F9 429 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 BCAS4Q8TDM0 211 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 TMEM255BQ8WV15 326 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 MEPEQ9NQ76 525 aaPredicted RBP16.18■□□□□ 0.18
SMIM4-204ENST00000482728 ZNF229Q9UJW7 825 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 A4GNTQ9UNA3 340 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 SAMD4AQ9UPU9 718 aaKnown RBP16.18■□□□□ 0.18
SMIM4-204ENST00000482728 FAM32AQ9Y421 112 aaKnown RBP16.18■□□□□ 0.18
SMIM4-204ENST00000482728 SNX13Q9Y5W8 968 aa16.18■□□□□ 0.18
SMIM4-204ENST00000482728 HRNRQ86YZ3 2850 aaPredicted RBP16.18■□□□□ 0.18
SMIM4-204ENST00000482728 ENO4A6NNW6 628 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 C11orf98E9PRG8 122 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 PDLIM1O00151 329 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 FUT1P19526 365 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 HOXC12P31275 282 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 MSX2P35548 267 aaPredicted RBP16.17■□□□□ 0.18
SMIM4-204ENST00000482728 KEAP1Q14145 624 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 TRAM2Q15035 370 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 HMBOX1Q6NT76 420 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 LRRC17Q8N6Y2 441 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 PIK3C3Q8NEB9 887 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 C1orf162Q8NEQ5 155 aaPredicted RBP16.17■□□□□ 0.18
SMIM4-204ENST00000482728 OR52N5Q8NH56 324 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 SGTBQ96EQ0 304 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 HS3ST6Q96QI5 342 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 LINC00470Q9BZP3 86 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 GORASP2Q9H8Y8 452 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 DCAF13Q9NV06 445 aaKnown RBP16.17■□□□□ 0.18
SMIM4-204ENST00000482728 RHCGQ9UBD6 479 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 CD300AQ9UGN4 299 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 MAGEL2Q9UJ55 1249 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 PLEKHA6Q9Y2H5 1048 aa16.17■□□□□ 0.18
SMIM4-204ENST00000482728 A0A1W2PPR1 153 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 HTR3EA5X5Y0 456 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 BLOC1S5-TXNDC5H3BN57 136 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 RNF13O43567 381 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 TRAF3IP2O43734 574 aaPredicted RBP16.16■□□□□ 0.18
SMIM4-204ENST00000482728 UPK3AO75631 287 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 ZNF432O94892 652 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 RAF1P04049 648 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 HLA-DOBP13765 273 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 CALB2P22676 271 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 UGT2B15P54855 530 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 LGALS3BPQ08380 585 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 KLHL24Q6TFL4 600 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 NANOGNBQ7Z5D8 188 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 ANKK1Q8NFD2 765 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 PFN4Q8NHR9 129 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 NINJ1Q92982 152 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 OR2M2Q96R28 347 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 EMC6Q9BV81 110 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 UBTD1Q9HAC8 227 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 ENPP4Q9Y6X5 453 aa16.16■□□□□ 0.18
SMIM4-204ENST00000482728 SLC35F4A4IF30 521 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 J3KTA2 159 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 OR7A10O76100 309 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 IGF2P01344 180 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 CD3EP07766 207 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 LOXP28300 417 aaPredicted RBP16.15■□□□□ 0.18
SMIM4-204ENST00000482728 IST1P53990 364 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 ROR2Q01974 943 aaKnown RBP16.15■□□□□ 0.18
SMIM4-204ENST00000482728 ZP4Q12836 540 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 CARD17Q5XLA6 110 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 KLHL17Q6TDP4 642 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 PAMR1Q6UXH9 720 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 ZNF704Q6ZNC4 412 aaPredicted RBP16.15■□□□□ 0.18
SMIM4-204ENST00000482728 RRM2BQ7LG56 351 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 OFCC1Q8IZS5 231 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 C17orf78Q8N4C9 275 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 RBM15BQ8NDT2 890 aaKnown RBP16.15■□□□□ 0.18
SMIM4-204ENST00000482728 TXNDC15Q96J42 360 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 NSMCE2Q96MF7 247 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 ALKBH3Q96Q83 286 aaPredicted RBP16.15■□□□□ 0.18
SMIM4-204ENST00000482728 B3GAT2Q9NPZ5 323 aa16.15■□□□□ 0.18
SMIM4-204ENST00000482728 CCM2LQ9NUG4 571 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms