RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 EMC3Q9P0I2 261 aa9.34□□□□□ -0.91
SSBP1-210ENST00000481508 ACTR3BQ9P1U1 418 aa9.34□□□□□ -0.91
SSBP1-210ENST00000481508 FOXD3Q9UJU5 478 aaPredicted RBP9.34□□□□□ -0.91
SSBP1-210ENST00000481508 PRPF19Q9UMS4 504 aaKnown RBP9.34□□□□□ -0.91
SSBP1-210ENST00000481508 SAMD4AQ9UPU9 718 aaKnown RBP9.34□□□□□ -0.91
SSBP1-210ENST00000481508 TRBV4-1A0A0J9YWV2 114 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 SH3D21A4FU49 640 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 TUBAL3A6NHL2 446 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 C11orf98E9PRG8 122 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 C16orf97H3BN30 126 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 PLPP3O14495 311 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 GPR171O14626 319 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 OR2T1O43869 369 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 LYZL6O75951 148 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 OR7A10O76100 309 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 MT-ND1P03886 318 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 ITGA5P08648 1049 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 ASAH2BP0C7U1 165 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 THRBP10828 461 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 MAKP20794 623 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 GTF2E2P29084 291 aaKnown RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 CLDN17P56750 224 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 ST3GAL3Q11203 375 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 POU4F3Q15319 338 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 SPATS1Q496A3 300 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 TSPO2Q5TGU0 170 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 TMEM225Q6GV28 225 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 LCN8Q6JVE9 175 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 PGM2L1Q6PCE3 622 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 H1FNTQ75WM6 255 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 ZNF100Q8IYN0 542 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 ADPRHL1Q8NDY3 354 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 TMEM45BQ96B21 275 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 APH1AQ96BI3 265 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 ZC3HAV1LQ96H79 300 aaKnown RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 TXNDC15Q96J42 360 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 DHRS1Q96LJ7 313 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 OXGR1Q96P68 337 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 FUZQ9BT04 418 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 FNDC11Q9BVV2 318 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 SF3B5Q9BWJ5 86 aaKnown RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 ASPNQ9BXN1 380 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 CADM1Q9BY67 442 aaKnown RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 NMNAT1Q9HAN9 279 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 SLC7A10Q9NS82 523 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 MED29Q9NX70 200 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 MRPL39Q9NYK5 338 aaKnown RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 TAS2R5Q9NYW4 299 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 C6orf203Q9P0P8 240 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 RASD1Q9Y272 281 aa9.33□□□□□ -0.92
SSBP1-210ENST00000481508 RAI1Q7Z5J4 1906 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-210ENST00000481508 A0A087WUU8 490 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 A0A1W2PPR1 153 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 J3QL48 77 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 PDLIM1O00151 329 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 GYG2O15488 501 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 MRPL33O75394 65 aaKnown RBP9.32□□□□□ -0.92
SSBP1-210ENST00000481508 GMNNO75496 209 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 UPK3AO75631 287 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 SERPINI2O75830 405 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 ZNF432O94892 652 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 IFI30P13284 250 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 COX5AP20674 150 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 RBM34P42696 430 aaKnown RBP9.32□□□□□ -0.92
SSBP1-210ENST00000481508 CBX1P83916 185 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 IL1RL1Q01638 556 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 TLE4Q04727 773 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 FAPQ12884 760 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 PMS2P3Q13401 168 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 FHL1Q13642 323 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 TRIM25Q14258 630 aaKnown RBP9.32□□□□□ -0.92
SSBP1-210ENST00000481508 TRAM2Q15035 370 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 SEC23BQ15437 767 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 PHYHD1Q5SRE7 291 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 SFRP5Q5T4F7 317 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 C9orf135Q5VTT2 229 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 NIPAL3Q6P499 406 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 PODNL1Q6PEZ8 512 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 SEZ6L2Q6UXD5 910 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 Q6ZT83 130 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 BEND4Q6ZU67 534 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 AAED1Q7RTV5 226 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 KIF18BQ86Y91 864 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 NRMQ8IXM6 262 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 ARHGAP24Q8N264 748 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 SCAIQ8N9R8 606 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 OR5J2Q8NH18 312 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 MOSPD2Q8NHP6 518 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 S100PBPQ96BU1 408 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 ASB9Q96DX5 294 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 SGTBQ96EQ0 304 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 LRRC46Q96FV0 321 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 SEPHS2Q99611 448 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 BTBD10Q9BSF8 475 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 EMC6Q9BV81 110 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 SLC19A3Q9BZV2 496 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 ACTR6Q9GZN1 396 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 FKRPQ9H9S5 495 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 VNN3Q9NY84 501 aa9.32□□□□□ -0.92
SSBP1-210ENST00000481508 KCNN3Q9UGI6 736 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms