RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 RORAP35398 523 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 CAPZA2P47755 286 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 UNQ9370/PRO34162Q6UXP9 181 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 JAZF1Q86VZ6 243 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 ZNF563Q8TA94 476 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 RPS4Y2Q8TD47 263 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 LIPHQ8WWY8 451 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 GCDHQ92947 438 aaPredicted RBP12.78□□□□□ -0.36
PHF3-204ENST00000481385 ZDHHC12Q96GR4 267 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 TMEM246Q9BRR3 403 aa12.78□□□□□ -0.36
PHF3-204ENST00000481385 PHF7Q9BWX1 381 aaPredicted RBP12.78□□□□□ -0.36
PHF3-204ENST00000481385 EXOSC3Q9NQT5 275 aaKnown RBP12.78□□□□□ -0.36
PHF3-204ENST00000481385 KHNYNO15037 678 aaKnown RBP12.77□□□□□ -0.36
PHF3-204ENST00000481385 SRMP19623 302 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 EBPQ15125 230 aaKnown RBP12.77□□□□□ -0.36
PHF3-204ENST00000481385 HSD17B12Q53GQ0 312 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 HES5Q5TA89 166 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 PYHIN1Q6K0P9 492 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 OR6V1Q8N148 313 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 PELOQ9BRX2 385 aaKnown RBP12.77□□□□□ -0.36
PHF3-204ENST00000481385 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 RXFP3Q9NSD7 469 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 EPHA6Q9UF33 1036 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 MRM2Q9UI43 246 aaKnown RBP12.77□□□□□ -0.36
PHF3-204ENST00000481385 CACNG2Q9Y698 323 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 FER1L5A0AVI2 2057 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 RP1P56715 2156 aa12.77□□□□□ -0.36
PHF3-204ENST00000481385 IGHV1OR21-1A0A087WYE8 117 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 FAM172BPA6NC97 362 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 HCRTR2O43614 444 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 ORC5O43913 435 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 ARL6IP5O75915 188 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 NR0B1P51843 470 aaKnown RBP12.77□□□□□ -0.37
PHF3-204ENST00000481385 CLDN12P56749 244 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 HNRNPKP61978 463 aaKnown RBP eCLIP12.77□□□□□ -0.37
PHF3-204ENST00000481385 CCDC58Q4VC31 144 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 TIGD4Q8IY51 512 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 TCTE3Q8IZS6 198 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 CREB3L1Q96BA8 519 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 MAP6Q96JE9 813 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 CHRNA10Q9GZZ6 450 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.77□□□□□ -0.374e-7■■■■□ 24.6
PHF3-204ENST00000481385 AUNIPQ9H7T9 357 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 ING1Q9UK53 422 aaPredicted RBP12.77□□□□□ -0.37
PHF3-204ENST00000481385 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.37
PHF3-204ENST00000481385 TRAV6A0A075B6T7 132 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 A0A0A6YYJ9 748 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 FAM47E-STBD1D6RA91 191 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 UPK3AO75631 287 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 ANKRD34CP0C6C1 535 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 BCKDHBP21953 392 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 RRAS2P62070 204 aaPredicted RBP12.76□□□□□ -0.37
PHF3-204ENST00000481385 IL10RAQ13651 578 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 BCL2L15Q5TBC7 163 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 SHISA6Q6ZSJ9 500 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 ASCC1Q8N9N2 400 aaKnown RBP12.76□□□□□ -0.37
PHF3-204ENST00000481385 ADAM19Q9H013 955 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 RAB33BQ9H082 229 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 CHRDQ9H2X0 955 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 WDR76Q9H967 626 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 FKRPQ9H9S5 495 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 MMACHCQ9Y4U1 282 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 PCDHGA9Q9Y5G4 932 aaKnown RBP12.76□□□□□ -0.37
PHF3-204ENST00000481385 PCNX3Q9H6A9 2034 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 TCRBV16S1A1N1A0A5B0 115 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 ZNF879B4DU55 563 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 H3BSH0 61 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 GATBO75879 557 aaKnown RBP12.76□□□□□ -0.37
PHF3-204ENST00000481385 PIAS2O75928 621 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 AKR7A3O95154 331 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 HSD11B2P80365 405 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 NTRK2Q16620 822 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 LANCL3Q6ZV70 420 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 OVCH1Q7RTY7 1134 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 SIAH3Q8IW03 269 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 FOXN4Q96NZ1 517 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 OR1F2PQ96R84 312 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 UNC13CQ8NB66 2214 aa12.76□□□□□ -0.37
PHF3-204ENST00000481385 ABHD16AO95870 558 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 CD1AP06126 327 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 YES1P07947 543 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 SLC25A1P53007 311 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 SMAD4Q13485 552 aaKnown RBP12.75□□□□□ -0.37
PHF3-204ENST00000481385 NSDHLQ15738 373 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 LIPNQ5VXI9 398 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 KANSL1Q7Z3B3 1105 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 CMTM4Q8IZR5 234 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 NUDT15Q9NV35 164 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 FRRS1LQ9P0K9 344 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 ABRACLQ9P1F3 81 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 ZNF281Q9Y2X9 895 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 UBL3O95164 117 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 IGF2P01344 180 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 ELAVL1Q15717 326 aaKnown RBP12.75□□□□□ -0.37
PHF3-204ENST00000481385 FAM199XQ6PEV8 388 aaPredicted RBP12.75□□□□□ -0.37
PHF3-204ENST00000481385 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
PHF3-204ENST00000481385 C16orf47Q6ZP98 133 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms