RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 E7EQL1 145 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 FXYD1O00168 92 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 SLC22A2O15244 555 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 TRAF3IP2O43734 574 aaPredicted RBP13.14□□□□□ -0.31
TDP2-205ENST00000480495 UPK3AO75631 287 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 MT-ATP6P00846 226 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 NQO1P15559 274 aaKnown RBP13.14□□□□□ -0.31
TDP2-205ENST00000480495 CD247P20963 164 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 CBLP22681 906 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 UBE2NP61088 152 aaKnown RBP13.14□□□□□ -0.31
TDP2-205ENST00000480495 ROR2Q01974 943 aaKnown RBP13.14□□□□□ -0.31
TDP2-205ENST00000480495 LGALS3BPQ08380 585 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 VEZF1Q14119 521 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 NPTX1Q15818 432 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 TBRG1Q3YBR2 411 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 HIKESHIQ53FT3 197 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 RABL3Q5HYI8 236 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 ENTPD8Q5MY95 495 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 ERICH5Q6P6B1 374 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 ANKRD16Q6P6B7 361 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 CLEC9AQ6UXN8 241 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 LINC00114Q6XXX2 140 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 UEVLDQ8IX04 471 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 CIARTQ8N365 385 aaPredicted RBP13.14□□□□□ -0.31
TDP2-205ENST00000480495 GPR137CQ8N3F9 429 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 PIK3C3Q8NEB9 887 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 BCL2L2Q92843 193 aaPredicted RBP13.14□□□□□ -0.31
TDP2-205ENST00000480495 TAMM41Q96BW9 452 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 SMR3AQ99954 134 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 NOX1Q9Y5S8 564 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 CAPN7Q9Y6W3 813 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 ZFHX3Q15911 3703 aa13.14□□□□□ -0.31
TDP2-205ENST00000480495 USF3Q68DE3 2245 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 ARPC4-TTLL3A0A0A6YYG9 625 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 TRAPPC13A5PLN9 417 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 CPSF4LA6NMK7 179 aaKnown RBP13.13□□□□□ -0.31
TDP2-205ENST00000480495 MS4A18H0YCH9 400 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 HEXAP06865 529 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 TTKP33981 857 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 CDKN1AP38936 164 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 LTBQ06643 244 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 PUDPQ08623 228 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 SPOCK1Q08629 439 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 SF3A3Q12874 501 aaKnown RBP eCLIP13.13□□□□□ -0.314e-14■■■■■ 33.6
TDP2-205ENST00000480495 PMS2P3Q13401 168 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 MS4A18Q3C1V0 323 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 C3orf36Q3SXR2 165 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 ZNF544Q6NX49 715 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 SNX32Q86XE0 403 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 FBXL14Q8N1E6 418 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 C10orf53Q8N6V4 93 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 VANGL1Q8TAA9 524 aaPredicted RBP13.13□□□□□ -0.31
TDP2-205ENST00000480495 ADAMTS16Q8TE57 1224 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 MPP4Q96JB8 637 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 MOGAT1Q96PD6 335 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 OR2M2Q96R28 347 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 PCDHAC1Q9H158 963 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 BARX1Q9HBU1 254 aaPredicted RBP13.13□□□□□ -0.31
TDP2-205ENST00000480495 GPR35Q9HC97 309 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 CBLN4Q9NTU7 201 aa13.13□□□□□ -0.31
TDP2-205ENST00000480495 LOC100653049A0A140TA62 436 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 KRT34O76011 436 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 IFNA14P01570 189 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 MDH1P40925 334 aaKnown RBP13.12□□□□□ -0.31
TDP2-205ENST00000480495 FABP6P51161 128 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 CLEC12BQ2HXU8 276 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 TTC33Q6PID6 262 aaPredicted RBP13.12□□□□□ -0.31
TDP2-205ENST00000480495 PXKQ7Z7A4 578 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 RBM45Q8IUH3 476 aaKnown RBP13.12□□□□□ -0.31
TDP2-205ENST00000480495 TMEM123Q8N131 208 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 MUC15Q8N387 334 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 FAM169BQ8N8A8 192 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 OR4D11Q8NGI4 311 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 PROX1Q92786 737 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 LRR1Q96L50 414 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
TDP2-205ENST00000480495 HS6ST2Q96MM7 605 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 SLC38A2Q96QD8 506 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 SLC19A3Q9BZV2 496 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 BAG5Q9UL15 447 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 ATP23Q9Y6H3 246 aa13.12□□□□□ -0.31
TDP2-205ENST00000480495 NIPBLQ6KC79 2804 aaeCLIP13.12□□□□□ -0.31
TDP2-205ENST00000480495 PLPP3O14495 311 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 SMAD7O15105 426 aaKnown RBP13.11□□□□□ -0.31
TDP2-205ENST00000480495 LYPD3O95274 346 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 HPRP00739 348 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 PTNP21246 168 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 CRYBA2P53672 197 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 ARF1P84077 181 aaKnown RBP13.11□□□□□ -0.31
TDP2-205ENST00000480495 POU3F1Q03052 451 aaPredicted RBP13.11□□□□□ -0.31
TDP2-205ENST00000480495 KRTAP21-3Q3LHN1 58 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 C11orf71Q6IPW1 123 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 NHLRC1Q6VVB1 395 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 B3GLCTQ6Y288 498 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 CCDC36Q8IYA8 594 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 C20orf196Q8IYI0 205 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 C10orf82Q8WW14 230 aa13.11□□□□□ -0.31
TDP2-205ENST00000480495 POM121Q96HA1 1249 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms