RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 C2orf68Q2NKX9 166 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 STPG1Q5TH74 334 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 HAGHLQ6PII5 290 aaPredicted RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ZNF620Q6ZNG0 422 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 MEPCEQ7L2J0 689 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 OR6V1Q8N148 313 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 SLC44A3Q8N4M1 653 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 FRMD1Q8N878 549 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 MRPL43Q8N983 215 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 CYB561A3Q8NBI2 242 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 FAM71CQ8NEG0 241 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 OR5M9Q8NGP3 310 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ADAT1Q9BUB4 502 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 MFFQ9GZY8 342 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 UBQLN3Q9H347 655 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 PURGQ9UJV8 347 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ASPMQ8IZT6 3477 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 LRRK1Q38SD2 2015 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 COL4A3Q01955 1670 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 UBE2QL1A1L167 161 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 DISC1C4P0D8 188 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 GPR31O00270 319 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ABCD4O14678 606 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 KRT33AO76009 404 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ATP1B1P05026 303 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 HMGN1P05114 100 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 MAT2AP31153 395 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 STARP49675 285 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 GFRA1P56159 465 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 H2BFSP57053 126 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 SORDQ00796 357 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 DHODHQ02127 395 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 BDH1Q02338 343 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 TP53I3Q53FA7 332 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 B3GNTL1Q67FW5 361 aaPredicted RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 NIPAL3Q6P499 406 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 SEZ6L2Q6UXD5 910 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 DPPA4Q7L190 304 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ADCK2Q7Z695 626 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 SPICQ8N5J4 248 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 C12orf76Q8N812 135 aaPredicted RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ZNF565Q8N9K5 539 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 HAVCR2Q8TDQ0 301 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 TSNAXQ99598 290 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 DPH1Q9BZG8 443 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 DNTTIP1Q9H147 329 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ANKRD19PQ9H560 264 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 EXOSC3Q9NQT5 275 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 TAS2R10Q9NYW0 307 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 IL20Q9NYY1 176 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 ABRACLQ9P1F3 81 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 USP36Q9P275 1121 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 OR10H1Q9Y4A9 318 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 IRAK3Q9Y616 596 aa9.3□□□□□ -0.92
COMMD4-203ENST00000480484 MTCL1Q9Y4B5 1905 aaKnown RBP9.3□□□□□ -0.92
COMMD4-203ENST00000480484 A0A1W2PPC1 479 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 OR2M5A3KFT3 312 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 HPP00738 406 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 HMGN2P05204 90 aaKnown RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 SAGP10523 405 aaPredicted RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 STAT5AP42229 794 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 PRLHRP49683 370 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 MECP2P51608 486 aaKnown RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 AP3S2P59780 193 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 HTRA4P83105 476 aaPredicted RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 IL10RAQ13651 578 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 RAB30Q15771 203 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 PABPC1L2AQ5JQF8 200 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 WIPI1Q5MNZ9 446 aaPredicted RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 COL13A1Q5TAT6 717 aaPredicted RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 PRAMEF13Q5VWM6 474 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 TRAPPC5Q8IUR0 188 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 ZFP82Q8N141 532 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 OR5T2Q8NGG2 359 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 THEM6Q8WUY1 208 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 TNFAIP8L1Q8WVP5 186 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 WNT2BQ93097 391 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 OR14A2Q96R54 314 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 BBS4Q96RK4 519 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 AICDAQ9GZX7 198 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 LHX9Q9NQ69 397 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 KLHL9Q9P2J3 617 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 A8MXE2 369 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 IMPA2O14732 288 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 PLPP2O43688 288 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 PRAMEF2O60811 474 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 LILRA1O75019 489 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 THY1P04216 161 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 ARL3P36405 182 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 RPE65Q16518 533 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 MAPK14Q16539 360 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 FCRLAQ7L513 359 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 CBLN2Q8IUK8 224 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 MCATQ8IVS2 390 aaKnown RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 GID4Q8IVV7 300 aa9.29□□□□□ -0.92
COMMD4-203ENST00000480484 FAM98AQ8NCA5 519 aaKnown RBP9.29□□□□□ -0.92
COMMD4-203ENST00000480484 TMEM185AQ8NFB2 350 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms