RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 RPS4Y1P22090 263 aaKnown RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 SRP14P37108 136 aaKnown RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 GZMKP49863 264 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 FOXG1P55316 489 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 WDR4P57081 412 aaKnown RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 LSM11P83369 360 aaKnown RBP eCLIP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 CDK6Q00534 326 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 POU3F1Q03052 451 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 LGALS3BPQ08380 585 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 SCARB2Q14108 478 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 CEACAM16Q2WEN9 425 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 TRMT5Q32P41 509 aaKnown RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 FAM69AQ5T7M9 428 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 FAM166AQ6J272 317 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 KRT80Q6KB66 452 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 B3GLCTQ6Y288 498 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 CREB3L2Q70SY1 520 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 H1FNTQ75WM6 255 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 ICA1LQ8NDH6 482 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 BHLHE22Q8NFJ8 381 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 OR4F15Q8NGB8 312 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 OR1K1Q8NGR3 316 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 MFSD8Q8NHS3 518 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF417Q8TAU3 575 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 SPDL1Q96EA4 605 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 SLC47A1Q96FL8 570 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF587Q96SQ5 575 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 KATNB1Q9BVA0 655 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 PLA2G12AQ9BZM1 189 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 ULBP2Q9BZM5 246 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 ADAM19Q9H013 955 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 PLK3Q9H4B4 646 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 PIF1Q9H611 641 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 SDR39U1Q9NRG7 319 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 CA10Q9NS85 328 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 ARGLU1Q9NWB6 273 aaPredicted RBP6.18□□□□□ -1.42
COL17A1-205ENST00000480127 PRDM4Q9UKN5 801 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 TRIM33Q9UPN9 1127 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 USP22Q9UPT9 525 aa6.18□□□□□ -1.42
COL17A1-205ENST00000480127 A0A1B0GWA3 101 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 A0A1W2PPW3 197 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 VWC2LB2RUY7 222 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 B9A039 149 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 hCG_2039718K7EN88 272 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 RNF13O43567 381 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF500O60304 480 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 UPK3AO75631 287 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 LY6HO94772 140 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 TGDSO95455 350 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 C1QCP02747 245 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 NUDT7P0C024 238 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 CECR9P0C854 216 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 ADORA3P0DMS8 318 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 NPR2P20594 1047 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 GRPRP30550 384 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 PRKAR1BP31321 381 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 ARR3P36575 388 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 RPS23P62266 143 aaKnown RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 ARF1P84077 181 aaKnown RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 H3F3AP84243 136 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 SNTB2Q13425 540 aaKnown RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 DAG1Q14118 895 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 MMEL1Q495T6 779 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 GLIPR1L2Q4G1C9 344 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 C1QTNF12Q5T7M4 302 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 LIPNQ5VXI9 398 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 ULK3Q6PHR2 472 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 SHQ1Q6PI26 577 aaKnown RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF813Q6ZN06 617 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 NET1Q7Z628 596 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 CCDC36Q8IYA8 594 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 SVOPLQ8N434 492 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 ANKS4BQ8N8V4 417 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 WDR31Q8NA23 367 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 C11orf65Q8NCR3 313 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 HIPK4Q8NE63 616 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 VANGL1Q8TAA9 524 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 MSI2Q96DH6 328 aaKnown RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 KTI12Q96EK9 354 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 THOC1Q96FV9 657 aaKnown RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 C1orf159Q96HA4 380 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 OXGR1Q96P68 337 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 ZNF317Q96PQ6 595 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 PRR14Q9BWN1 585 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 RNF121Q9H920 327 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 TMBIM4Q9HC24 238 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 MYOZ1Q9NP98 299 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 SLC6A13Q9NSD5 602 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 INTS9Q9NV88 658 aaKnown RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 TESQ9UGI8 421 aaKnown RBP6.17□□□□□ -1.42
COL17A1-205ENST00000480127 RCE1Q9Y256 329 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 CMAHPQ9Y471 501 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 CORINQ9Y5Q5 1042 aa6.17□□□□□ -1.42
COL17A1-205ENST00000480127 IGHV1-18A0A0C4DH31 117 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 A0A0G2JND7 137 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 LOC390937A0A1W2PQ73 354 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 NDUFS8O00217 210 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 KPNA4O00629 521 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-205ENST00000480127 KCNAB3O43448 404 aa6.16□□□□□ -1.42
COL17A1-205ENST00000480127 SPRY1O43609 319 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms