RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 MARVELD1Q9BSK0 173 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CHST6Q9GZX3 395 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 RYDENQ9NUL5 291 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 APOBEC3BQ9UH17 382 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF860A6NHJ4 632 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 B4DGG1 531 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 PRAMEF26H0Y7S4 382 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 TGM5O43548 720 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 STK17BO94768 372 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 IGLV3-25P01717 112 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 PAX6P26367 422 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CD70P32970 193 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 TNFRSF17Q02223 184 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SPATC1Q76KD6 591 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 P4HA3Q7Z4N8 544 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CALHM3Q86XJ0 350 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 DTWD2Q8NBA8 298 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 PINX1Q96BK5 328 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 KIRREL1Q96J84 757 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 COPS3Q9UNS2 423 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CFAP20Q9Y6A4 193 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CACNA1CQ13936 2221 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 PPP5D1E7EU14 171 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 K7ERQ8 282 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 TXNL1O43396 289 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SCO2O43819 266 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 GP1BAP07359 652 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SNRPBP14678 240 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SHC1P29353 583 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CTHP32929 405 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MLLT10P55197 1068 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 KIAA0141Q14154 515 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 NSDHLQ15738 373 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 ODF4Q2M2E3 257 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CTSL3PQ5NE16 218 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 C1orf87Q8N0U7 546 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 ZFP82Q8N141 532 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 OR52I1Q8NGK6 324 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 OR6K3Q8NGY3 331 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SAT2Q96F10 170 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 KCNJ15Q99712 375 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SAMD10Q9BYL1 202 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 NIT2Q9NQR4 276 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 LAMP3Q9UQV4 416 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 TRBV4-1A0A0J9YWV2 114 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC5A10A0PJK1 596 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 IFITM5A6NNB3 132 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 HMSDA8MTL9 139 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 HIDE1A8MVS5 230 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CSO75390 466 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MBP02144 154 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 LCATP04180 440 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 F7P08709 466 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 LAP3P28838 519 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 EPHA4P54764 986 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF74Q16587 644 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CTU1Q7Z7A3 348 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 OR2A12Q8NGT7 310 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 DCBLD2Q96PD2 775 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 UBL7Q96S82 380 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CHRDL1Q9BU40 450 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SPHK1Q9NYA1 384 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 PLEK2Q9NYT0 353 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 FZD1Q9UP38 647 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC35F4A4IF30 521 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MT-ND4P03905 459 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 P04436 131 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SOX18P35713 384 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MMP15P51511 669 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 LCN6P62502 163 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MFAP5Q13361 173 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 HNF4GQ14541 408 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 LCN10Q6JVE6 187 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 TMUB2Q71RG4 321 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MFSD4AQ8N468 514 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 PAQR8Q8TEZ7 354 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 HMGB4Q8WW32 186 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SMIM19Q96E16 107 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MVB12AQ96EY5 273 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 FYTTD1Q96QD9 318 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 OCSTAMPQ9BR26 566 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 SELENOIQ9C0D9 397 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CXorf36Q9H7Y0 433 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 MYEF2Q9P2K5 600 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 DNAJB11Q9UBS4 358 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 FBXL2Q9UKC9 423 aa5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 CHD2O14647 1828 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-205ENST00000480058 OR5K3A6NET4 321 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 CEP290O15078 2479 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 ZFAND5O76080 213 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 KITLGP21583 273 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 DRD1P21728 446 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 BCKDHBP21953 392 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF136P52737 540 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 C21orf58P58505 322 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 PLGLB1Q02325 96 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 C19orf57Q0VDD7 668 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 CDK5R1Q15078 307 aa5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 MRPL2Q5T653 305 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-205ENST00000480058 FAHD2BQ6P2I3 314 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms