RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	C5orf46	Q6UWT4	87 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	CARM1	Q86X55	608 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	C10orf105	Q8TEF2	133 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	SLC47A1	Q96FL8	570 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	MCHR1	Q99705	422 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	PRRG4	Q9BZD6	226 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	PCDHAC1	Q9H158	963 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	MAGIX	Q9H6Y5	334 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	CHODL	Q9H9P2	273 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	TIGAR	Q9NQ88	270 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894		H3BML4	177 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	GMFG	O60234	142 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	GKN3P	P0CG01	181 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	CXCR1	P25024	350 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	ACAA2	P42765	397 aa	Known RBP	13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	SMIM11A	P58511	58 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	RAC1	P63000	192 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	CHRNB3	Q05901	458 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	SELENBP1	Q13228	472 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	TMEM44	Q2T9K0	475 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	NDUFAF6	Q330K2	333 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	C1orf146	Q5VVC0	180 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	ALKBH2	Q6NS38	261 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	CADM2	Q8N3J6	435 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	GPR32P1	Q8NGA4	272 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	ZFAND2B	Q8WV99	257 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	MPP4	Q96JB8	637 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	HSH2D	Q96JZ2	352 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	CACNG6	Q9BXT2	260 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	POMP	Q9Y244	141 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	ARFGEF3	Q5TH69	2177 aa		13.72	□□□□□ -0.21
HDLBP-238	ENST00000479894	LOC100289279	A0A1B0GTE1	492 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	TRAPPC13	A5PLN9	417 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	HTR3E	A5X5Y0	456 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	DPRX	A6NFQ7	191 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	ACOT8	O14734	319 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	ZNF208	O43345	1280 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	OIP5	O43482	229 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	PRKD3	O94806	890 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	OR5F1	O95221	314 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	GPI	P06744	558 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	PSMA4	P25789	261 aa	Known RBP	13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	MSX2	P35548	267 aa	Predicted RBP	13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	COMP	P49747	757 aa	Predicted RBP	13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	RNF144A	P50876	292 aa	Predicted RBP	13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	CRYBA2	P53672	197 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	TAS2R41	P59536	307 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	RAB35	Q15286	201 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	SFRP5	Q5T4F7	317 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	C11orf71	Q6IPW1	123 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	C3orf33	Q6P1S2	294 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	SEZ6L2	Q6UXD5	910 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	GABRG1	Q8N1C3	465 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	ZNF525	Q8N782	197 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	DDIT4L	Q96D03	193 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	CLPTM1L	Q96KA5	538 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	ZNF347	Q96SE7	839 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	POTEKP	Q9BYX7	375 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	CBLN4	Q9NTU7	201 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	SLC7A8	Q9UHI5	535 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	CLEC4A	Q9UMR7	237 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	CHST2	Q9Y4C5	530 aa		13.71	□□□□□ -0.21
HDLBP-238	ENST00000479894	SHISA9	B4DS77	424 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	NTN1	O95631	604 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	IL32	P24001	234 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	TACR3	P29371	465 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	ST3GAL3	Q11203	375 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	FOXF1	Q12946	379 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	OR1Q1	Q15612	314 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	GLIPR1L2	Q4G1C9	344 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	ALG10B	Q5I7T1	473 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	CYP2R1	Q6VVX0	501 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	ESPNL	Q6ZVH7	1005 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	SSX8	Q7RTT4	187 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	GGN	Q86UU5	652 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	LILRA2	Q8N149	483 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	OR6T1	Q8NGN1	323 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	MSI2	Q96DH6	328 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	C1orf159	Q96HA4	380 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	RADIL	Q96JH8	1075 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	EPYC	Q99645	322 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	FNDC11	Q9BVV2	318 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	GMPR2	Q9P2T1	348 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	CHRNA9	Q9UGM1	479 aa		13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	MCTS1	Q9ULC4	181 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-238	ENST00000479894	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894		A0A0A6YYJ9	748 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894		H7C417	338 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894		M0R3H8	397 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894	RHCE	P18577	417 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894	SLC7A1	P30825	629 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894	TTK	P33981	857 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894	EIF1AX	P47813	144 aa	Known RBP	13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894	CDH11	P55287	796 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894	MS4A2	Q01362	244 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894	ENTPD8	Q5MY95	495 aa		13.69	□□□□□ -0.22
HDLBP-238	ENST00000479894	GTF2IRD2B	Q6EKJ0	949 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms