RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CHID1Q9BWS9 393 aa7.92□□□□□ -1.14
DDX56-211ENST00000479602 TAPBPLQ9BX59 468 aa7.92□□□□□ -1.14
DDX56-211ENST00000479602 OR10A4Q9H209 315 aa7.92□□□□□ -1.14
DDX56-211ENST00000479602 PIGMQ9H3S5 423 aa7.92□□□□□ -1.14
DDX56-211ENST00000479602 GSX1Q9H4S2 264 aaPredicted RBP7.92□□□□□ -1.14
DDX56-211ENST00000479602 C8orf4Q9NR00 106 aa7.92□□□□□ -1.14
DDX56-211ENST00000479602 EMC3Q9P0I2 261 aa7.92□□□□□ -1.14
DDX56-211ENST00000479602 KLHL13Q9P2N7 655 aa7.92□□□□□ -1.14
DDX56-211ENST00000479602 STX18Q9P2W9 335 aaKnown RBP7.92□□□□□ -1.14
DDX56-211ENST00000479602 AP4S1Q9Y587 144 aa7.92□□□□□ -1.14
DDX56-211ENST00000479602 FBN3Q75N90 2809 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 ZC3H12DA2A288 527 aaKnown RBP7.91□□□□□ -1.14
DDX56-211ENST00000479602 AHCYL1O43865 530 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 MGRN1O60291 552 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 GADD45GO95257 159 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 SYNGR4O95473 234 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 IL2RAP01589 272 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 HRGP04196 525 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 TNFRSF1BP20333 461 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 BMP5P22003 454 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 PAX7P23759 505 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 CTSSP25774 331 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 OMPP47874 163 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 GSSP48637 474 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 STARP49675 285 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 UGT2B15P54855 530 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 PRPS1P60891 318 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 FOXF2Q12947 444 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 FHL1Q13642 323 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 SLC17A1Q14916 467 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 PON3Q15166 354 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 FAM205BPQ63HN1 556 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 PAMR1Q6UXH9 720 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 H1FNTQ75WM6 255 aaPredicted RBP7.91□□□□□ -1.14
DDX56-211ENST00000479602 FCRLAQ7L513 359 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 FAM214BQ7L5A3 538 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 CHMP1BQ7LBR1 199 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 SPATA24Q86W54 205 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 NKAIN4Q8IVV8 208 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 PARP8Q8N3A8 854 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 SVOPLQ8N434 492 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 C9orf106Q8NAJ2 232 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 OR4K5Q8NGD3 323 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 OR5J2Q8NH18 312 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 FNDC8Q8TC99 324 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 TMEM255BQ8WV15 326 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 TAAR8Q969N4 342 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 KTI12Q96EK9 354 aaPredicted RBP7.91□□□□□ -1.14
DDX56-211ENST00000479602 RSRC1Q96IZ7 334 aaKnown RBP7.91□□□□□ -1.14
DDX56-211ENST00000479602 OR5B2Q96R09 309 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 NAA11Q9BSU3 229 aaPredicted RBP7.91□□□□□ -1.14
DDX56-211ENST00000479602 BDH2Q9BUT1 245 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 SRXN1Q9BYN0 137 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 OR11A1Q9GZK7 315 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 NDEL1Q9GZM8 345 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 DENND2DQ9H6A0 471 aaPredicted RBP7.91□□□□□ -1.14
DDX56-211ENST00000479602 REEP1Q9H902 201 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 NANSQ9NR45 359 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 B3GAT1Q9P2W7 334 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 ENOPH1Q9UHY7 261 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 ING1Q9UK53 422 aaPredicted RBP7.91□□□□□ -1.14
DDX56-211ENST00000479602 CAMK2AQ9UQM7 478 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 PLEKHA6Q9Y2H5 1048 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 NOX1Q9Y5S8 564 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 HIVEP2P31629 2446 aa7.91□□□□□ -1.14
DDX56-211ENST00000479602 SHISA8B8ZZ34 492 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 H3BNX3 289 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 J3KTA2 159 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 TNFSF11O14788 317 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 MSTNO14793 375 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 CLOCKO15516 846 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 AKAP8O43823 692 aaKnown RBP7.9□□□□□ -1.14
DDX56-211ENST00000479602 CXCL13O43927 109 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 TNFSF13O75888 250 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 OR7A10O76100 309 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 ZNF432O94892 652 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 CST1P01037 141 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 CGAP01215 116 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 NR2C1P13056 603 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 ANXA8P13928 327 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 CD53P19397 219 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 GSTM3P21266 225 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 CBLP22681 906 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 FASP25445 335 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 AGTR1P30556 359 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 RRM2P31350 389 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 SFTPDP35247 375 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 EIF1AXP47813 144 aaKnown RBP7.9□□□□□ -1.14
DDX56-211ENST00000479602 RNF144AP50876 292 aaPredicted RBP7.9□□□□□ -1.14
DDX56-211ENST00000479602 ZNF133P52736 654 aaPredicted RBP7.9□□□□□ -1.14
DDX56-211ENST00000479602 PUDPQ08623 228 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 TSPAN31Q12999 210 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 MICAQ29983 383 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 DEFB113Q30KQ7 82 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 NRN1LQ496H8 165 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 FAHD1Q6P587 224 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 SHQ1Q6PI26 577 aaKnown RBP7.9□□□□□ -1.14
DDX56-211ENST00000479602 ZNF627Q7L945 461 aa7.9□□□□□ -1.14
DDX56-211ENST00000479602 CXorf67Q86X51 503 aaPredicted RBP7.9□□□□□ -1.14
DDX56-211ENST00000479602 LINC01560Q8TB33 94 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms