RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	TMEM27	Q9HBJ8	222 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	SLC13A4	Q9UKG4	626 aa		13.12	□□□□□ -0.31
CCNL1-222	ENST00000479596	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	IGHV1-18	A0A0C4DH31	117 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	ATP6V1G2-DDX39B	F2Z307	99 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	RPL36A-HNRNPH2	H7BZ11	118 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	KRT33A	O76009	404 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	WNT11	O96014	354 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	HLA-DOB	P13765	273 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	ROR2	Q01974	943 aa	Known RBP	13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	1e-11	■■■■■ 53.2
CCNL1-222	ENST00000479596	VEZF1	Q14119	521 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	RABL3	Q5HYI8	236 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	PHYHD1	Q5SRE7	291 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	AGAP6	Q5VW22	663 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	NANOGP8	Q6NSW7	305 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	PATL1	Q86TB9	770 aa	Known RBP	13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	CALHM3	Q86XJ0	350 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	MUC15	Q8N387	334 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	RNF217	Q8TC41	542 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	MCHR1	Q99705	422 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	TMEM43	Q9BTV4	400 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	CACNG6	Q9BXT2	260 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	NANOG	Q9H9S0	305 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	OBP2B	Q9NPH6	170 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	SAR1A	Q9NR31	198 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	CBLN4	Q9NTU7	201 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596	POU2F3	Q9UKI9	436 aa		13.11	□□□□□ -0.31
CCNL1-222	ENST00000479596		A0A096LPE4	126 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596		A0A1W2PPZ6	126 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	ZNF503-AS2	A6NEH8	195 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	CPSF4L	A6NMK7	179 aa	Known RBP	13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	RNF223	E7ERA6	249 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	SLC43A1	O75387	559 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	ARFIP2	P53365	341 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	TUBA1B	P68363	451 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	TUBA4A	P68366	448 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	KLF10	Q13118	480 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	MFSD13A	Q14CX5	517 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	VMAC	Q2NL98	169 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	COQ5	Q5HYK3	327 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	ENTPD8	Q5MY95	495 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	REP15	Q6BDI9	236 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	ZNF544	Q6NX49	715 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	ANKRD16	Q6P6B7	361 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	ZNF613	Q6PF04	617 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	KLHL24	Q6TFL4	600 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	TUBA1A	Q71U36	451 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	CCDC80	Q76M96	950 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	SLC30A8	Q8IWU4	369 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	SCAI	Q8N9R8	606 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	MAPK1IP1L	Q8NDC0	245 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	ANKK1	Q8NFD2	765 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	SLC38A2	Q96QD8	506 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	EPYC	Q99645	322 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	SEC61A2	Q9H9S3	476 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	GPR35	Q9HC97	309 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	MRPL39	Q9NYK5	338 aa	Known RBP	13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	SELENON	Q9NZV5	590 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	CRNN	Q9UBG3	495 aa	Predicted RBP	13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	USP22	Q9UPT9	525 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	MOK	Q9UQ07	419 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	CORIN	Q9Y5Q5	1042 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	ATP23	Q9Y6H3	246 aa		13.1	□□□□□ -0.31
CCNL1-222	ENST00000479596	CHP2	O43745	196 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	IGLV1-44	P01699	117 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	TROVE2	P10155	538 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	FABP6	P51161	128 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	SH3BGR	P55822	239 aa	Predicted RBP	13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	ARF1	P84077	181 aa	Known RBP	13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	GUCY1A3	Q02108	690 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	POU3F1	Q03052	451 aa	Predicted RBP	13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	C1D	Q13901	141 aa	Known RBP	13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	CEACAM16	Q2WEN9	425 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	HMBOX1	Q6NT76	420 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	MYPOP	Q86VE0	399 aa	Predicted RBP	13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	UEVLD	Q8IX04	471 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	FBXL14	Q8N1E6	418 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	DEPDC4	Q8N2C3	294 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	HTRA1	Q92743	480 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	LRRC58	Q96CX6	371 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	TXNDC15	Q96J42	360 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	HS6ST2	Q96MM7	605 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	ZNF426	Q9BUY5	554 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	PCDHAC1	Q9H158	963 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	FKRP	Q9H9S5	495 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	MED29	Q9NX70	200 aa		13.09	□□□□□ -0.31
CCNL1-222	ENST00000479596	HIVEP2	P31629	2446 aa		13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596		A0A096LNT2	108 aa		13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596		H7C417	338 aa		13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596	PLPP3	O14495	311 aa		13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596	IGKV3-15	P01624	115 aa		13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596	CECR9	P0C854	216 aa		13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596	NQO1	P15559	274 aa	Known RBP	13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596	UBE2N	P61088	152 aa	Known RBP	13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596	IL1RL1	Q01638	556 aa		13.08	□□□□□ -0.32
CCNL1-222	ENST00000479596	PUDP	Q08623	228 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms