RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MAL2Q969L2 176 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 C3orf49Q96BT1 292 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 ADAD1Q96M93 576 aaKnown RBP12.57□□□□□ -0.4
ATG4B-218ENST00000479554 C1QTNF6Q9BXI9 259 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 CACNG6Q9BXT2 260 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 REG4Q9BYZ8 158 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 PIF1Q9H611 641 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 BCL2L10Q9HD36 194 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 SLC17A5Q9NRA2 495 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 SLAMF8Q9P0V8 285 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-218ENST00000479554 CHST2Q9Y4C5 530 aa12.57□□□□□ -0.4
ATG4B-218ENST00000479554 TMEM229AB2RXF0 380 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 ACOT8O14734 319 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 KRT33AO76009 404 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 AHSA1O95433 338 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 BMP2P12643 396 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 HOXB9P17482 250 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-218ENST00000479554 TCN1P20061 433 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-218ENST00000479554 GTF2E2P29084 291 aaKnown RBP12.56□□□□□ -0.4
ATG4B-218ENST00000479554 TTKP33981 857 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 GSK3BP49841 420 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 FABP6P51161 128 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 MS4A2Q01362 244 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 LIPEQ05469 1076 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 B3GLCTQ6Y288 498 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 MUC15Q8N387 334 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 STK35Q8TDR2 534 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 SLC26A7Q8TE54 656 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 SLC35B4Q969S0 331 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 ANKRD27Q96NW4 1050 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 TRIM15Q9C019 465 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 S100A14Q9HCY8 104 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 CBLN4Q9NTU7 201 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 STX18Q9P2W9 335 aaKnown RBP12.56□□□□□ -0.4
ATG4B-218ENST00000479554 RPS6KB2Q9UBS0 482 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 NKX1-2Q9UD57 310 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-218ENST00000479554 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-218ENST00000479554 B3GALT5Q9Y2C3 310 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 ATP23Q9Y6H3 246 aa12.56□□□□□ -0.4
ATG4B-218ENST00000479554 CSPG4Q6UVK1 2322 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 TRBV5-3A0A0A0MS03 114 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 SSX4O60224 188 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 NPIPB7O75200 414 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 VAMP5O95183 116 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 WNT11O96014 354 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-218ENST00000479554 CDH2P19022 906 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-218ENST00000479554 PPIBP23284 216 aaKnown RBP12.55□□□□□ -0.4
ATG4B-218ENST00000479554 MSX2P35548 267 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-218ENST00000479554 P2RY4P51582 365 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 NUDT6P53370 316 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 PRPS1P60891 318 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 HOXC5Q00444 222 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 SLC34A1Q06495 639 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 KRTAP1-1Q07627 177 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 RUNDC3AQ59EK9 446 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 RABL3Q5HYI8 236 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 GCNT6Q5T4J0 391 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 C1QTNF12Q5T7M4 302 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 C11orf71Q6IPW1 123 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 ZNF544Q6NX49 715 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 ZFP1Q6P2D0 407 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 DHFR2Q86XF0 187 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 PRIMA1Q86XR5 153 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 FAM156AQ8NDB6 213 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 HIPK4Q8NE63 616 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 BHLHE22Q8NFJ8 381 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-218ENST00000479554 NFKBIDQ8NI38 313 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 KCTD14Q9BQ13 255 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-218ENST00000479554 FKRPQ9H9S5 495 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 SLC25A37Q9NYZ2 338 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 VAPAQ9P0L0 249 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 RASD1Q9Y272 281 aa12.55□□□□□ -0.4
ATG4B-218ENST00000479554 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ELOA3DA6NLF2 546 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ZNF587BE7ETH6 402 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ARAFP10398 606 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ETS2P15036 469 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 PRKAR1BP31321 381 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 SELENOPP49908 381 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ELOA3BQ3SY89 546 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 HIKESHIQ53FT3 197 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 NIPAL3Q6P499 406 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 CREB3L2Q70SY1 520 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 SPATA24Q86W54 205 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 KRT73Q86Y46 540 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 MSRB3Q8IXL7 192 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ELOA3Q8NG57 546 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 MFSD8Q8NHS3 518 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 SLC25A36Q96CQ1 311 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 LRGUKQ96M69 825 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ALKBH3Q96Q83 286 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ECSITQ9BQ95 431 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 PCDHAC1Q9H158 963 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 ACTR3BQ9P1U1 418 aa12.54□□□□□ -0.4
ATG4B-218ENST00000479554 OR6C65A6NJZ3 312 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 FTCDNL1E5RQL4 147 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 C8BP07358 591 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms