RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ARPC2O15144 300 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 TRAF3IP2O43734 574 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-217ENST00000479161 SEMG1P04279 462 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 THBDP07204 575 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-217ENST00000479161 NQO1P15559 274 aaKnown RBP13.64□□□□□ -0.23
C9orf3-217ENST00000479161 NCK1P16333 377 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 NR1H2P55055 460 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 C1DQ13901 141 aaKnown RBP13.64□□□□□ -0.23
C9orf3-217ENST00000479161 DGCR6Q14129 220 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 TRIM25Q14258 630 aaKnown RBP13.64□□□□□ -0.23
C9orf3-217ENST00000479161 STK11Q15831 433 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 IQCCQ4KMZ1 466 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 BEX5Q5H9J7 111 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 TSPO2Q5TGU0 170 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 C22orf34Q6ZV56 151 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 SLC46A3Q7Z3Q1 461 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 TSEN54Q7Z6J9 526 aaKnown RBP13.64□□□□□ -0.23
C9orf3-217ENST00000479161 P3H2Q8IVL5 708 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 UEVLDQ8IX04 471 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 RNF148Q8N7C7 305 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 PIK3C3Q8NEB9 887 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 ACOT11Q8WXI4 607 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-217ENST00000479161 S100PBPQ96BU1 408 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 DHRS1Q96LJ7 313 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 FNDC11Q9BVV2 318 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 CLEC4MQ9H2X3 399 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-217ENST00000479161 MAN2C1Q9NTJ4 1040 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 NDUFAF4Q9P032 175 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 UPB1Q9UBR1 384 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 CCDC168Q8NDH2 2452 aa13.64□□□□□ -0.23
C9orf3-217ENST00000479161 OR5H1A6NKK0 313 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 KLF4O43474 513 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 CH25HO95992 272 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 HIST1H2ABP04908 130 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 HOXB6P17509 224 aaKnown RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 SH3BGRP55822 239 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 ZNF771Q7L3S4 317 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 HIST3H2AQ7L7L0 130 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 UBE2J2Q8N2K1 259 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 C10orf53Q8N6V4 93 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 FAM156AQ8NDB6 213 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 MAGEE2Q8TD90 523 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 TMEM255BQ8WV15 326 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 HIST1H2ACQ93077 130 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 SGTBQ96EQ0 304 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 ADAD1Q96M93 576 aaKnown RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 POLDIP3Q9BY77 421 aaKnown RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 NMNAT1Q9HAN9 279 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 MOV10Q9HCE1 1003 aaKnown RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 IL1RAPQ9NPH3 570 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 OBP2BQ9NPH6 170 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 TAS2R5Q9NYW4 299 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 SEC14L4Q9UDX3 406 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 FAM32AQ9Y421 112 aaKnown RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 CSMD2Q7Z408 3487 aa13.63□□□□□ -0.23
C9orf3-217ENST00000479161 HEATR1Q9H583 2144 aaKnown RBP13.63□□□□□ -0.23
C9orf3-217ENST00000479161 ENO4A6NNW6 628 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 CENPBD1B2RD01 187 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 SLC43A1O75387 559 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 OR7A10O76100 309 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 OR6A2O95222 327 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 HPRP00739 348 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 ITGA5P08648 1049 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 FUT1P19526 365 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 TCN1P20061 433 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-217ENST00000479161 UGT2B15P54855 530 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 CLDN17P56750 224 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 SMIM11AP58511 58 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 PRKCDQ05655 676 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 FAPQ12884 760 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 TAB1Q15750 504 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 GABRA6Q16445 453 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 DNAL1Q4LDG9 190 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 LCN8Q6JVE9 175 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 RINLQ6ZS11 566 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 PIWIL3Q7Z3Z3 882 aaKnown RBP13.62□□□□□ -0.23
C9orf3-217ENST00000479161 TMEM200AQ86VY9 491 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 CDC20BQ86Y33 519 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 TMEM123Q8N131 208 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 KDM8Q8N371 416 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 NINJ1Q92982 152 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 CSMD1Q96PZ7 3565 aa13.62□□□□□ -0.23
C9orf3-217ENST00000479161 PLCE1Q9P212 2302 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 ZNF587BE7ETH6 402 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 LRRN3E7EW58 273 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 SIAH2O43255 324 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 LYZL6O75951 148 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 ADORA3P0DMS8 318 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 LOXP28300 417 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-217ENST00000479161 SLC9A3P48764 834 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 SELENOPP49908 381 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 KRTAP10-9P60411 292 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 TRAP1Q12931 704 aaKnown RBP13.61□□□□□ -0.23
C9orf3-217ENST00000479161 TAF11Q15544 211 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 ANKRD34AQ69YU3 496 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 NIPAL3Q6P499 406 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 SEZ6L2Q6UXD5 910 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 TMPRSS11FQ6ZWK6 438 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms