RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IGSF10Q6WRI0 2623 aa11.68□□□□□ -0.54
CHD3-210ENST00000479080 LOC100130705A0A1B0GUX0 176 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 LOC102725191A0A1B0GVB3 256 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 TTLL8A6PVC2 850 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 H3BN98 237 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 RCBTB2O95199 551 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 TXNDC12O95881 172 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 CD14P08571 375 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 GABRB1P18505 474 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 SLC6A6P31641 620 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 PTGS2P35354 604 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 GGT2P36268 569 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 CTXN1P60606 82 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 EFNB1P98172 346 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 RUNX1T1Q06455 604 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 POU4F3Q15319 338 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 GUSBP1Q15486 140 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 ACKR1Q16570 336 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 ANKDD1AQ495B1 522 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 MESTQ5EB52 335 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 LAIR2Q6ISS4 152 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 FCRLAQ7L513 359 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 CD163Q86VB7 1156 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 LNX2Q8N448 690 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 DHRSXQ8N5I4 330 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 C9orf106Q8NAJ2 232 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 FAM57AQ8TBR7 257 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 TEX47Q8TBZ9 253 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 CPT1CQ8TCG5 803 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 CYGBQ8WWM9 190 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 RASD2Q96D21 266 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 HRASLS5Q96KN8 279 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 Q96M85 177 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 ZNF385AQ96PM9 386 aaKnown RBP11.67□□□□□ -0.54
CHD3-210ENST00000479080 DDOQ99489 341 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 INIPQ9NRY2 104 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 MED29Q9NX70 200 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
CHD3-210ENST00000479080 IER3IP1Q9Y5U9 82 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 SHANK1Q9Y566 2161 aa11.67□□□□□ -0.54
CHD3-210ENST00000479080 DNAJC13O75165 2243 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 IGKV3D-15A0A087WSY6 115 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 TEX13CA0A0J9YWL9 993 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 BCKDKO14874 412 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 RNF13O43567 381 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 EIF1BO60739 113 aaKnown RBP11.66□□□□□ -0.54
CHD3-210ENST00000479080 SERPINI2O75830 405 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 PRB1P04280 392 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 HIST1H2ABP04908 130 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 EDN3P14138 238 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 AHCYP23526 432 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 GTF2E2P29084 291 aaKnown RBP11.66□□□□□ -0.54
CHD3-210ENST00000479080 GRK5P34947 590 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 SLC16A1P53985 500 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 PRPS1P60891 318 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 RPS3AP61247 264 aaKnown RBP11.66□□□□□ -0.54
CHD3-210ENST00000479080 POU3F1Q03052 451 aaPredicted RBP11.66□□□□□ -0.54
CHD3-210ENST00000479080 TOP3AQ13472 1001 aaPredicted RBP11.66□□□□□ -0.54
CHD3-210ENST00000479080 KEAP1Q14145 624 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 PDSS1Q5T2R2 415 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 ARMC4Q5T2S8 1044 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 ZNF691Q5VV52 312 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 RPL13AP3Q6NVV1 102 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 GFRALQ6UXV0 394 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 RPTNQ6XPR3 784 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 DPY19L2P2Q6ZN68 376 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 PTCHD4Q6ZW05 846 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 HIST3H2AQ7L7L0 130 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 LSM14AQ8ND56 463 aaKnown RBP11.66□□□□□ -0.54
CHD3-210ENST00000479080 OR9K2Q8NGE7 335 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 APH1BQ8WW43 257 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 ASB10Q8WXI3 467 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 HIST1H2ACQ93077 130 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 OXGR1Q96P68 337 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 IFT27Q9BW83 186 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 POLDIP3Q9BY77 421 aaKnown RBP11.66□□□□□ -0.54
CHD3-210ENST00000479080 VCXQ9H320 206 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 CLEC4AQ9UMR7 237 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 RNF6Q9Y252 685 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 RASD1Q9Y272 281 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 ZNF175Q9Y473 711 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 ORC6Q9Y5N6 252 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 FLVCR1Q9Y5Y0 555 aa11.66□□□□□ -0.54
CHD3-210ENST00000479080 FASNP49327 2511 aaKnown RBP11.66□□□□□ -0.54
CHD3-210ENST00000479080 NPIPB13A6NJU9 1138 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 NPIPB4C9JG80 1138 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 H0YAE9 185 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 H7C1C5 153 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 ARPC3O15145 178 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 SURF4O15260 269 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 PRKYO43930 277 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 C1QL1O75973 258 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 ZNF432O94892 652 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 TOXO94900 526 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 TPOP07202 933 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 APEHP13798 732 aaKnown RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 IFNGR1P15260 489 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 HIST1H1CP16403 213 aaKnown RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 CDH2P19022 906 aaPredicted RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 RPL4P36578 427 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms