RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 ABCE1P61221 599 aaKnown RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 MRPS11P82912 194 aaKnown RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 LARS2Q15031 903 aaKnown RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 MAPK11Q15759 364 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 ELFN2Q5R3F8 820 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 COX20Q5RI15 118 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 KRT80Q6KB66 452 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 OGFOD2Q6N063 350 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 SHQ1Q6PI26 577 aaKnown RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 MDP1Q86V88 176 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 VRK2Q86Y07 508 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 KDM8Q8N371 416 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 PIK3C3Q8NEB9 887 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 OR51F2Q8NH61 342 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 CLDND2Q8NHS1 167 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 RDH5Q92781 318 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 GCDHQ92947 438 aaPredicted RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 SLC35B4Q969S0 331 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 SLC25A36Q96CQ1 311 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 OR52E6Q96RD3 313 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 JMJD8Q96S16 334 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 PTDSS2Q9BVG9 487 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 RBM4Q9BWF3 364 aaKnown RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 MRPL37Q9BZE1 423 aaKnown RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 ROPN1BQ9BZX4 212 aaPredicted RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 TPK1Q9H3S4 243 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 DENND2DQ9H6A0 471 aaPredicted RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 ROPN1Q9HAT0 212 aaPredicted RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 B3GNT2Q9NY97 397 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 B3GAT1Q9P2W7 334 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 PCDHB10Q9UN67 800 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 ZNF232Q9UNY5 417 aa8.31□□□□□ -1.08
CCM2-210ENST00000478169 ZNF443Q9Y2A4 671 aaPredicted RBP8.31□□□□□ -1.08
CCM2-210ENST00000478169 TRAV20A0A0B4J274 112 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 ZNF503-AS2A6NEH8 195 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 AIM2O14862 343 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 BIRC5O15392 142 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 HPXP02790 462 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 GAAP10253 952 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 ZNF35P13682 527 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 PRG2P13727 222 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 ANPEPP15144 967 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 CREB1P16220 341 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 COL8A2P25067 703 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 GLRXP35754 106 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 RPS5P46782 204 aaKnown RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 LIMS1P48059 325 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 MVDP53602 400 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 HILS1P60008 231 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 UFM1P61960 85 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 RPS23P62266 143 aaKnown RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 EGR4Q05215 589 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 IFFO1Q0D2I5 559 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 C1DQ13901 141 aaKnown RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 GSG1Q2KHT4 349 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 C5orf46Q6UWT4 87 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 ZNF627Q7L945 461 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 NET1Q7Z628 596 aaPredicted RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 PEG10Q86TG7 708 aaKnown RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 TMEM123Q8N131 208 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 CLIP4Q8N3C7 705 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 PNPT1Q8TCS8 783 aaKnown RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 SLC38A5Q8WUX1 472 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 ZNF837Q96EG3 531 aaPredicted RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 KTI12Q96EK9 354 aaPredicted RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 LRR1Q96L50 414 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 TEX37Q96LM6 180 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 LRRC37BQ96QE4 947 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 OR2M2Q96R28 347 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 SPATA9Q9BWV2 254 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 NUF2Q9BZD4 464 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 MEAF6Q9HAF1 191 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 C12orf10Q9HB07 376 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 CACYBPQ9HB71 228 aaKnown RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 THUMPD1Q9NXG2 353 aaKnown RBP8.3□□□□□ -1.08
CCM2-210ENST00000478169 HAO1Q9UJM8 370 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 IFT52Q9Y366 437 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 CHST2Q9Y4C5 530 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 NOX1Q9Y5S8 564 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 PKD1L1Q8TDX9 2849 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 ARHGAP32A7KAX9 2087 aa8.3□□□□□ -1.08
CCM2-210ENST00000478169 A0A0G2JPF8 293 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 TMEM247A6NEH6 219 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 HNRNPCL2B2RXH8 293 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 HNRNPCL3B7ZW38 293 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 RFXANKO14593 260 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ZNF500O60304 480 aaPredicted RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 HNRNPCL1O60812 293 aaKnown RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 PNPP00491 289 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 HLA-HP01893 362 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ALDOCP09972 364 aaKnown RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 HNRNPCL4P0DMR1 293 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 CD79AP11912 226 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ZNF14P17017 642 aaPredicted RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 IL12AP29459 219 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 CRATP43155 626 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 SLC1A6P48664 564 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ARFIP2P53365 341 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 NME5P56597 212 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 DSTNP60981 165 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms