RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CRLS1Q9UJA2 301 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 HOOK1Q9UJC3 728 aaKnown RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 FBXW2Q9UKT8 454 aa3.75□□□□□ -1.81
VPS50-214ENST00000477935 BOKQ9UMX3 212 aaPredicted RBP3.75□□□□□ -1.81
VPS50-214ENST00000477935 IGLV3-16A0A075B6K0 115 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 A0A087WUV0 522 aaPredicted RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 A0A1B0GVY2 172 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 SLC5A10A0PJK1 596 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 FAM170AA1A519 330 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 MPTX1A8MV57 137 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 H0YAE9 185 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 KIF5CO60282 957 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 KRT33AO76009 404 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 TGFAP01135 160 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 FTH1P02794 183 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 SOD3P08294 240 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 MYBL1P10243 752 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 POU2F1P14859 743 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 EZRP15311 586 aaKnown RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 RPL35AP18077 110 aaKnown RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 TBXA2RP21731 343 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 FOXN2P32314 431 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 XGP55808 180 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 CLDN15P56746 228 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 SKP1P63208 163 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 OGDHQ02218 1023 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 ACSM1Q08AH1 577 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 CALCOCO2Q13137 446 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 CAMK2DQ13557 499 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 FASTKD3Q14CZ7 662 aaKnown RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 TYSND1Q2T9J0 566 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 HKDC1Q2TB90 917 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 GLIPR1L2Q4G1C9 344 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 KRBOX4Q5JUW0 171 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 SLC22A10Q63ZE4 541 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 OR4A47Q6IF82 309 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 PAQR6Q6TCH4 344 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 OPN5Q6U736 354 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 UGT2A3Q6UWM9 527 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 IL17RELQ6ZVW7 336 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 GLT6D1Q7Z4J2 308 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 SNX20Q7Z614 316 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 ALPK2Q86TB3 2170 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 CATSPERDQ86XM0 798 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 LRRC25Q8N386 305 aaPredicted RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 BANPQ8N9N5 519 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 NOA1Q8NC60 698 aaKnown RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 APCDD1LQ8NCL9 501 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 CCNYQ8ND76 341 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 NFAM1Q8NET5 270 aaPredicted RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 OR2A1Q8NGT9 310 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 OR9A4Q8NGU2 314 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 NELFBQ8WX92 580 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 ELMO1Q92556 727 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 OTUB1Q96FW1 271 aaPredicted RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 VMP1Q96GC9 406 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 RADILQ96JH8 1075 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 PEBP4Q96S96 227 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 EBNA1BP2Q99848 306 aaKnown RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 DPH7Q9BTV6 452 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 FN3KRPQ9HA64 309 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 ANKHQ9HCJ1 492 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 FANCFQ9NPI8 374 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 DNAJC11Q9NVH1 559 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 NUDT4Q9NZJ9 180 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 PTBP2Q9UKA9 531 aaKnown RBP3.74□□□□□ -1.81
VPS50-214ENST00000477935 IKZF3Q9UKT9 509 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 ATG4BQ9Y4P1 393 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 SMAD5-AS1Q9Y6J3 95 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 IKBKGQ9Y6K9 419 aa3.74□□□□□ -1.81
VPS50-214ENST00000477935 KCNE1BA0A087WTH5 132 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 TRBV5-5A0A0J9YX44 114 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 TRBV11-1A0A0K0K1C0 115 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 A0A1W2PP18 115 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 F8VZ95 297 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 NDUFS8O00217 210 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 SOCS3O14543 225 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 IDH3BO43837 385 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 ZNF354AO60765 605 aaPredicted RBP3.73□□□□□ -1.81
VPS50-214ENST00000477935 OR2J2O76002 312 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 OR6B1O95007 311 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 ACTL6AO96019 429 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 C1QAP02745 245 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 FHP07954 510 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 OR56A5P0C7T3 313 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 CPN1P15169 458 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 UCHL3P15374 230 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 EEF1B2P24534 225 aaKnown RBP3.73□□□□□ -1.81
VPS50-214ENST00000477935 PTPN6P29350 595 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 GCKP35557 465 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 XIAPP98170 497 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 PNOCQ13519 176 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 GRB7Q14451 532 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 RAB35Q15286 201 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 TAF1AQ15573 450 aaPredicted RBP3.73□□□□□ -1.81
VPS50-214ENST00000477935 OR2A2Q6IF42 318 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 CYP4V2Q6ZWL3 525 aaPredicted RBP3.73□□□□□ -1.81
VPS50-214ENST00000477935 CREBRFQ8IUR6 639 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 DND1Q8IYX4 353 aaKnown RBP3.73□□□□□ -1.81
VPS50-214ENST00000477935 C2orf73Q8N5S3 287 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms