RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 CREB3L2Q70SY1 520 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 HIST3H2AQ7L7L0 130 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 PXKQ7Z7A4 578 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 GPAT4Q86UL3 456 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 CCDC71Q8IV32 467 aaPredicted RBP17.72■□□□□ 0.43
ACTB-210ENST00000477812 LIX1LQ8IVB5 337 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 MCEMP1Q8IX19 187 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 OR51A7Q8NH64 312 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 HIST1H2ACQ93077 130 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 ZNF385AQ96PM9 386 aaKnown RBP17.72■□□□□ 0.43
ACTB-210ENST00000477812 TNFRSF13CQ96RJ3 184 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 TACO1Q9BSH4 297 aaKnown RBP17.72■□□□□ 0.43
ACTB-210ENST00000477812 SFXN3Q9BWM7 321 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 GABARAPL1Q9H0R8 117 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 OAZ3Q9UMX2 235 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 MGAT4BQ9UQ53 548 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 RNF6Q9Y252 685 aa17.72■□□□□ 0.43
ACTB-210ENST00000477812 DOPEY1Q5JWR5 2465 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 UNC119BA6NIH7 251 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 BLOC1S5-TXNDC5H3BN57 136 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 PLGP00747 810 aaPredicted RBP17.71■□□□□ 0.43
ACTB-210ENST00000477812 PRKACGP22612 351 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 ZBED5Q49AG3 693 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 ANKRD34AQ69YU3 496 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 VWA1Q6PCB0 445 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 CD300LDQ6UXZ3 194 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 ZNF620Q6ZNG0 422 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 NUFIP2Q7Z417 695 aaKnown RBP17.71■□□□□ 0.43
ACTB-210ENST00000477812 SVOPLQ8N434 492 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 TMEM45BQ96B21 275 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 STARD4Q96DR4 205 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 NIPSNAP1Q9BPW8 284 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 EMC3Q9P0I2 261 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 ZNF629Q9UEG4 869 aaPredicted RBP17.71■□□□□ 0.43
ACTB-210ENST00000477812 NOX1Q9Y5S8 564 aa17.71■□□□□ 0.43
ACTB-210ENST00000477812 WIPF3A6NGB9 483 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 G3V2T6 193 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 GPR171O14626 319 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 CGAP01215 116 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 TP53P04637 393 aaPredicted RBP17.7■□□□□ 0.42
ACTB-210ENST00000477812 POU2F1P14859 743 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 EDNRAP25101 427 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 SIRPAP78324 504 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 RCN1Q15293 331 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 CDSNQ15517 529 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 THSD4Q6ZMP0 1018 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 BTLAQ7Z6A9 289 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 KIF18BQ86Y91 864 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 HIPK1Q86Z02 1210 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 WDFY1Q8IWB7 410 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 RELL2Q8NC24 303 aaPredicted RBP17.7■□□□□ 0.42
ACTB-210ENST00000477812 ANKK1Q8NFD2 765 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 OR6K3Q8NGY3 331 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 ITLN2Q8WWU7 325 aaPredicted RBP17.7■□□□□ 0.42
ACTB-210ENST00000477812 GTPBP3Q969Y2 492 aaKnown RBP17.7■□□□□ 0.42
ACTB-210ENST00000477812 ZNF775Q96BV0 537 aaPredicted RBP17.7■□□□□ 0.42
ACTB-210ENST00000477812 ENKD1Q9H0I2 346 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 EMC9Q9Y3B6 208 aa17.7■□□□□ 0.42
ACTB-210ENST00000477812 NPIPB13A6NJU9 1138 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 NPIPB4C9JG80 1138 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 C11orf98E9PRG8 122 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 ZG16O60844 167 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 OR6A2O95222 327 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 RNF224P0DH78 156 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 ZNF23P17027 643 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 ZNF43P17038 809 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 AHCYP23526 432 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 CHRNB4P30926 498 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 POU3F1Q03052 451 aaPredicted RBP17.69■□□□□ 0.42
ACTB-210ENST00000477812 ALG10Q5BKT4 473 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 TMEM201Q5SNT2 666 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 GALNT5Q7Z7M9 940 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 ZDHHC13Q8IUH4 622 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 UEVLDQ8IX04 471 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 CNEP1R1Q8N9A8 125 aa17.69■□□□□ 0.42
ACTB-210ENST00000477812 GPX7Q96SL4 187 aaPredicted RBP17.69■□□□□ 0.42
ACTB-210ENST00000477812 TENM4Q6N022 2769 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 SAC3D1A6NKF1 404 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 MCIDASD6RGH6 385 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 RNF13O43567 381 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 ZNF432O94892 652 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 IGHMP01871 453 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 F13BP05160 661 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 ANPEPP15144 967 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 AGAP20933 346 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 OPRM1P35372 400 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 DAPP51397 102 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 ARHGDIAP52565 204 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 PRPS1P60891 318 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 EEF1A1P5Q5VTE0 462 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 SMARCD3Q6STE5 483 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 KLHL17Q6TDP4 642 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 TFAP2EQ6VUC0 442 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 RASSF6Q6ZTQ3 369 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 ALPK2Q86TB3 2170 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 CLDN22Q8N7P3 220 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 FANK1Q8TC84 345 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 SDCCAG3Q96C92 435 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 TXNDC15Q96J42 360 aa17.68■□□□□ 0.42
ACTB-210ENST00000477812 PLSCR4Q9NRQ2 329 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms