RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	SCN5A	Q14524	2016 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ALPK3	Q96L96	1907 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GBF1	Q92538	1859 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TRIP11	Q15643	1979 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520		A0A087WUJ7	227 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	TRBV23-1	A0A0A0MS06	115 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ANKRD20A5P	A0PJZ0	165 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	LRIT2	A6NDA9	550 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	CXorf65	A6NEN9	183 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520		F8VVB4	439 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520		F8VWA3	439 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPL36A-HNRNPH2	H7BZ11	118 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520		M0R143	59 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	DVL1	O14640	695 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF197	O14709	1029 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	TAAR5	O14804	337 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	DLEU1	O43261	78 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	HSPA12A	O43301	675 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	SYT7	O43581	403 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	HCRTR2	O43614	444 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ICOSLG	O75144	302 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	NDUFS3	O75489	264 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	MED6	O75586	246 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	STK16	O75716	305 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	SPDEF	O95238	335 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	SIX6	O95475	246 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	MOCS2	O96007	188 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	GCG	P01275	180 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	GBA	P04062	536 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	IFNW1	P05000	195 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ATP1B1	P05026	303 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	RHO	P08100	348 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR8G3P	P0DMU2	310 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	HSD3B1	P14060	373 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ARSA	P15289	507 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	TYMP	P19971	482 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	HSD3B2	P26439	372 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	NDUFS1	P28331	727 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	HOXA11	P31270	313 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	PNPLA4	P41247	253 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	MTNR1A	P48039	350 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	TTPA	P49638	278 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	NDUFV1	P49821	464 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	PPT1	P50897	306 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	DVL1P1	P54792	670 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDH12	P55289	794 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	WNT3A	P56704	352 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	RGS8	P57771	180 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	CYCS	P99999	105 aa	Known RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDK5	Q00535	292 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	BCL2L1	Q07817	233 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	NAE1	Q13564	534 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	GANAB	Q14697	944 aa	Known RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	USF2	Q15853	346 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	NDUFAF6	Q330K2	333 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	C9orf152	Q5JTZ5	239 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	UBE2NL	Q5JXB2	153 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	DCAF10	Q5QP82	559 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	DCST1	Q5T197	706 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	C9orf64	Q5T6V5	341 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	SYPL2	Q5VXT5	272 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	NKAIN2	Q5VXU1	208 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	RNF219	Q5W0B1	726 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	GRHL2	Q6ISB3	625 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	SFXN4	Q6P4A7	337 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF613	Q6PF04	617 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ENPP7	Q6UWV6	458 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPS27L	Q71UM5	84 aa	Known RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	LINGO2	Q7L985	606 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	OVCH1	Q7RTY7	1134 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	SMIM15	Q7Z3B0	74 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR2W3	Q7Z3T1	314 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	C6orf120	Q7Z4R8	191 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	VTCN1	Q7Z7D3	282 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	FAM131B	Q86XD5	332 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	TGIF2LX	Q8IUE1	241 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	CBLN2	Q8IUK8	224 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	C9orf40	Q8IXQ3	194 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	DEFB106A	Q8N104	65 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	RYBP	Q8N488	228 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	PRR18	Q8N4B5	295 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	LMNTD1	Q8N9Z9	388 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR1J1	Q8NGS3	322 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR4L1	Q8NH43	312 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	SPPL3	Q8TCT6	385 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	BRIX1	Q8TDN6	353 aa	Known RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ING5	Q8WYH8	240 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	HSD17B8	Q92506	261 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ECHDC3	Q96DC8	303 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	FAM122A	Q96E09	287 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	C14orf79	Q96F83	325 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	IMP4	Q96G21	291 aa	Known RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	LRIG1	Q96JA1	1093 aa		4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZBTB45	Q96K62	511 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF582	Q96NG8	517 aa	Predicted RBP	4.31	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF385A	Q96PM9	386 aa	Known RBP	4.31	□□□□□ -1.72

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