RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 FGF21Q9NSA1 209 aa17.23■□□□□ 0.35
VARS2-209ENST00000477288 YKT6O15498 198 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 M6PRP20645 277 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 BIDP55957 195 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 ZNF74Q16587 644 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 MUL1Q969V5 352 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 INTS12Q96CB8 462 aaKnown RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 KATNB1Q9BVA0 655 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 ZNF587BE7ETH6 402 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 H3BNC9 293 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 PRKACAP17612 351 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 OR1D5P58170 312 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 ZFPM2Q8WW38 1151 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 MEIOCA2RUB1 952 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 CRYZL1O95825 349 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 HLA-DOBP13765 273 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 MYOGP15173 224 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 NFYBP25208 207 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 EBPQ15125 230 aaKnown RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 LRRC28Q86X40 367 aaPredicted RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 SLC7A5P1Q8MH63 180 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 OR2T27Q8NH04 317 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 FAM213BQ8TBF2 198 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 RAB3CQ96E17 227 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 C3orf30Q96M34 536 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 QRSL1Q9H0R6 528 aaKnown RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 ATP13A2Q9NQ11 1180 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 PADI1Q9ULC6 663 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 SERINC4A6NH21 518 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 MRPS14O60783 128 aaKnown RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 APOA2P02652 100 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 NDUFA6P56556 154 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 ILKQ13418 452 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 SLC5A12Q1EHB4 618 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 LEXMQ3ZCV2 418 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 MISPQ8IVT2 679 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 PATZ1Q9HBE1 687 aaKnown RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 MYH13Q9UKX3 1938 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 HEXAP06865 529 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 IGFBP1P08833 259 aaPredicted RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 IVDP26440 423 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 TGM4P49221 684 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 DLX5P56178 289 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 CAMK2BQ13554 666 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 LYPD4Q6UWN0 246 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 METTL4Q8N3J2 472 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 C3orf49Q96BT1 292 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 MS4A4AQ96JQ5 239 aa17.22■□□□□ 0.35
VARS2-209ENST00000477288 MRPS28Q9Y2Q9 187 aaKnown RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 MRPS2Q9Y399 296 aaKnown RBP17.22■□□□□ 0.35
VARS2-209ENST00000477288 TMED7-TICAM2A0A0A6YYA0 188 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 HSD17B6O14756 317 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 EDDM3AQ14507 147 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 OR56B1Q8NGI3 324 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 CDCP1Q9H5V8 836 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 NOX4Q9NPH5 578 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.21■□□□□ 0.35
VARS2-209ENST00000477288 ACSS1Q9NUB1 689 aaPredicted RBP17.21■□□□□ 0.35
VARS2-209ENST00000477288 TMED7Q9Y3B3 224 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 GPR45Q9Y5Y3 372 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 SNRPBP14678 240 aaKnown RBP17.21■□□□□ 0.35
VARS2-209ENST00000477288 GGHQ92820 318 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 C1orf123Q9NWV4 160 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 MYH11P35749 1972 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 C5P01031 1676 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 TMEM72A0PK05 275 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 ZNF814B7Z6K7 855 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 HCRTR1O43613 425 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 WNT11O96014 354 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 ITGAMP11215 1152 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 RAB5CP51148 216 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 HACD4Q5VWC8 232 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 TRBV4-1A0A0J9YWV2 114 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 CRYM-AS1A6NIL9 109 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 RAB11AP62491 216 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 MED25Q71SY5 747 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 LINC00346Q8IVM7 164 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 CSNK1G1Q9HCP0 422 aa17.21■□□□□ 0.35
VARS2-209ENST00000477288 OR5K3A6NET4 321 aa17.21■□□□□ 0.34
VARS2-209ENST00000477288 BLVRBP30043 206 aaPredicted RBP17.21■□□□□ 0.34
VARS2-209ENST00000477288 EPHA5P54756 1037 aa17.21■□□□□ 0.34
VARS2-209ENST00000477288 C17orf67Q0P5P2 114 aa17.21■□□□□ 0.34
VARS2-209ENST00000477288 RPL22L1Q6P5R6 122 aaKnown RBP17.21■□□□□ 0.34
VARS2-209ENST00000477288 SEC22AQ96IW7 307 aa17.21■□□□□ 0.34
VARS2-209ENST00000477288 LCORQ96JN0 433 aaPredicted RBP17.21■□□□□ 0.34
VARS2-209ENST00000477288 SORT1Q99523 831 aa17.21■□□□□ 0.34
VARS2-209ENST00000477288 PBX4Q9BYU1 374 aa17.21■□□□□ 0.34
VARS2-209ENST00000477288 CACNG3O60359 315 aa17.2■□□□□ 0.34
VARS2-209ENST00000477288 FZD7O75084 574 aa17.2■□□□□ 0.34
VARS2-209ENST00000477288 C21orf33P30042 268 aaPredicted RBP17.2■□□□□ 0.34
VARS2-209ENST00000477288 CBLL1Q75N03 491 aa17.2■□□□□ 0.34
VARS2-209ENST00000477288 ARRDC2Q8TBH0 407 aa17.2■□□□□ 0.34
VARS2-209ENST00000477288 HSFX1Q9UBD0 423 aa17.2■□□□□ 0.34
VARS2-209ENST00000477288 EMX1Q04741 257 aaPredicted RBP17.2■□□□□ 0.34
VARS2-209ENST00000477288 MFAP5Q13361 173 aa17.2■□□□□ 0.34
VARS2-209ENST00000477288 TESK1Q15569 626 aa17.2■□□□□ 0.34
VARS2-209ENST00000477288 B3GLCTQ6Y288 498 aa17.2■□□□□ 0.34
VARS2-209ENST00000477288 ADGRG5Q8IZF4 528 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms