RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ERVS71-1P61550 626 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 RPS23P62266 143 aaKnown RBP12.95□□□□□ -0.34
SMG5-204ENST00000476954 GALK2Q01415 458 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 TEKQ02763 1124 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 BNIP2Q12982 314 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 GSG1Q2KHT4 349 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 HFEQ30201 348 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 ZDHHC24Q6UX98 284 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 ARFGAP2Q8N6H7 521 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 LINC01006Q8NI28 216 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 CCL17Q92583 94 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 L3HYPDHQ96EM0 354 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 MRI1Q9BV20 369 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 ZNF350Q9GZX5 532 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 OR51B6Q9H340 312 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 C1orf109Q9NX04 203 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 DCAF16Q9NXF7 216 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 SLC35A3Q9Y2D2 325 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 STK38LQ9Y2H1 464 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.95□□□□□ -0.34
SMG5-204ENST00000476954 DOCK11Q5JSL3 2073 aa12.95□□□□□ -0.34
SMG5-204ENST00000476954 DSPPQ9NZW4 1301 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 GOLGA6L6A8MZA4 724 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 SRRM5B3KS81 715 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 FAM157BP0CG42 384 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 TCP1P17987 556 aaKnown RBP12.94□□□□□ -0.34
SMG5-204ENST00000476954 HTR3AP46098 478 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 PTDSS1P48651 473 aaKnown RBP12.94□□□□□ -0.34
SMG5-204ENST00000476954 PRKAA2P54646 552 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 GLO1Q04760 184 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 PCGF3Q3KNV8 242 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 ARHGAP11BQ3KRB8 267 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 MMEL1Q495T6 779 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 RFTN2Q52LD8 501 aaPredicted RBP12.94□□□□□ -0.34
SMG5-204ENST00000476954 PRAMEF8Q5VWM4 474 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 PRAMEF7Q5VXH5 474 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 LIPMQ5VYY2 423 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 TYW3Q6IPR3 259 aaKnown RBP12.94□□□□□ -0.34
SMG5-204ENST00000476954 CCNYL1Q8N7R7 359 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 PSMA8Q8TAA3 256 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 OR5P2Q8WZ92 322 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 NPHS2Q9NP85 383 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 NKIRAS2Q9NYR9 191 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 ZNF224Q9NZL3 707 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 KLHL21Q9UJP4 597 aa12.94□□□□□ -0.34
SMG5-204ENST00000476954 TRAV40A0A0B4J280 105 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 H0YL77 283 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 RAD51CO43502 376 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 SLC43A1O75387 559 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 PLATP00750 562 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 PRPH2P23942 346 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 ATP5F1P24539 256 aaPredicted RBP12.93□□□□□ -0.34
SMG5-204ENST00000476954 GIPRP48546 466 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 RPL38P63173 70 aaKnown RBP12.93□□□□□ -0.34
SMG5-204ENST00000476954 RAB39AQ14964 217 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 SPRNQ5BIV9 151 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 RGS7BPQ6MZT1 257 aaPredicted RBP12.93□□□□□ -0.34
SMG5-204ENST00000476954 BRD3OSQ6XYD6 125 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 LRRC8AQ8IWT6 810 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 GPR137CQ8N3F9 429 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 PAQR4Q8N4S7 273 aaPredicted RBP12.93□□□□□ -0.34
SMG5-204ENST00000476954 ACSS3Q9H6R3 686 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 DECR2Q9NUI1 292 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 ATP6V1HQ9UI12 483 aa12.93□□□□□ -0.34
SMG5-204ENST00000476954 DYNC2H1Q8NCM8 4307 aaKnown RBP12.92□□□□□ -0.34
SMG5-204ENST00000476954 IGLV3-9A0A075B6K5 115 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 ZNF99A8MXY4 864 aaPredicted RBP12.92□□□□□ -0.34
SMG5-204ENST00000476954 CSF1P09603 554 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 PATE4P0C8F1 98 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 MATN1P21941 496 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 SOAT1P35610 550 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 AQP5P55064 265 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 KCNJ10P78508 379 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 FUT5Q11128 374 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 C2orf68Q2NKX9 166 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 FAM153CQ494X1 144 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 AP1ARQ63HQ0 302 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 RUSC1-AS1Q66K80 236 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 CLEC6AQ6EIG7 209 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 C16orf62Q7Z3J2 963 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 CCDC36Q8IYA8 594 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 ANKK1Q8NFD2 765 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 SFXN5Q8TD22 340 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 MGARPQ8TDB4 240 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 SNX33Q8WV41 574 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 DCAKDQ8WVC6 231 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 MTERF3Q96E29 417 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 SAP30LQ9HAJ7 183 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 EXOSC3Q9NQT5 275 aaKnown RBP12.92□□□□□ -0.34
SMG5-204ENST00000476954 AURKAIP1Q9NWT8 199 aaPredicted RBP12.92□□□□□ -0.34
SMG5-204ENST00000476954 POLR3KQ9Y2Y1 108 aaPredicted RBP12.92□□□□□ -0.34
SMG5-204ENST00000476954 DNAH9Q9NYC9 4486 aa12.92□□□□□ -0.34
SMG5-204ENST00000476954 M0R3G1 203 aa12.91□□□□□ -0.34
SMG5-204ENST00000476954 FRS3O43559 492 aa12.91□□□□□ -0.34
SMG5-204ENST00000476954 CRCPO75575 148 aa12.91□□□□□ -0.34
SMG5-204ENST00000476954 VAMP5O95183 116 aa12.91□□□□□ -0.34
SMG5-204ENST00000476954 INHBAP08476 426 aa12.91□□□□□ -0.34
SMG5-204ENST00000476954 OR8G3PP0DMU2 310 aa12.91□□□□□ -0.34
SMG5-204ENST00000476954 KLF3P57682 345 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms