RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	EGFL7	Q9UHF1	273 aa		11.98	□□□□□ -0.49
RAB5A-208	ENST00000476544	TAGLN3	Q9UI15	199 aa		11.98	□□□□□ -0.49
RAB5A-208	ENST00000476544	ADAM21	Q9UKJ8	722 aa		11.98	□□□□□ -0.49
RAB5A-208	ENST00000476544	CORIN	Q9Y5Q5	1042 aa		11.98	□□□□□ -0.49
RAB5A-208	ENST00000476544	ANKRD17	O75179	2603 aa	Known RBP	11.98	□□□□□ -0.49
RAB5A-208	ENST00000476544	OR5F1	O95221	314 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	FAM107A	O95990	144 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	SERPINA1	P01009	418 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	TSPAN19	P0C672	248 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	ZNF43	P17038	809 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	ART1	P52961	327 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	ZP4	Q12836	540 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	FOXD4	Q12950	439 aa	Predicted RBP	11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	PMS2P3	Q13401	168 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	KRT72	Q14CN4	511 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	MFSD13A	Q14CX5	517 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	PPA1	Q15181	289 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	STK11	Q15831	433 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	FBXW10	Q5XX13	1052 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	GLYAT	Q6IB77	296 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	TTC33	Q6PID6	262 aa	Predicted RBP	11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	SPNS3	Q6ZMD2	512 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	P2RY8	Q86VZ1	359 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	KRTAP1-3	Q8IUG1	177 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	POMGNT2	Q8NAT1	580 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	CDRT15	Q96T59	188 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	FOXC2	Q99958	501 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	KCTD14	Q9BQ13	255 aa	Predicted RBP	11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	LINC00470	Q9BZP3	86 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	SLC19A3	Q9BZV2	496 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	SLC17A5	Q9NRA2	495 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	MED29	Q9NX70	200 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	RHCG	Q9UBD6	479 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	UPB1	Q9UBR1	384 aa		11.97	□□□□□ -0.49
RAB5A-208	ENST00000476544	CIB4	A0PJX0	185 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	SLC35F4	A4IF30	521 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	SHISA9	B4DS77	424 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	RPL36A-HNRNPH2	H7BZ11	118 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	KPNA4	O00629	521 aa	Predicted RBP	11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	MT-ATP6	P00846	226 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	MT-ND1	P03886	318 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	RAF1	P04049	648 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	FUT1	P19526	365 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	BSPH1	Q075Z2	132 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	LAPTM4A	Q15012	233 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	HIKESHI	Q53FT3	197 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	ADAM5	Q6NVV9	412 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	TBPL2	Q6SJ96	375 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	PXK	Q7Z7A4	578 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	MEX3D	Q86XN8	651 aa	Known RBP	11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	C20orf196	Q8IYI0	205 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	C10orf53	Q8N6V4	93 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	OR5J2	Q8NH18	312 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	TMEM239	Q8WW34	195 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	LIPH	Q8WWY8	451 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	GPR35	Q9HC97	309 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	SPAG4	Q9NPE6	437 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	DCAF13	Q9NV06	445 aa	Known RBP	11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	RCE1	Q9Y256	329 aa		11.96	□□□□□ -0.49
RAB5A-208	ENST00000476544	ZNF503-AS2	A6NEH8	195 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	ENO4	A6NNW6	628 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	GSTA4	O15217	222 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	PIP5K1C	O60331	668 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	ZNF682	O95780	498 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	THRB	P10828	461 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	HSD17B1	P14061	328 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	CDH2	P19022	906 aa	Predicted RBP	11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	DNASE1	P24855	282 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	HOXC12	P31275	282 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	RBM34	P42696	430 aa	Known RBP	11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	TAS2R41	P59536	307 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	ARF1	P84077	181 aa	Known RBP	11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	ROR2	Q01974	943 aa	Known RBP	11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	RUNX1T1	Q06455	604 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	PUDP	Q08623	228 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	C1D	Q13901	141 aa	Known RBP	11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	DEFB113	Q30KQ7	82 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	OR7E24	Q6IFN5	339 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	LRFN4	Q6PJG9	635 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	PGAM4	Q8N0Y7	254 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	OR1K1	Q8NGR3	316 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	MOSPD2	Q8NHP6	518 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	NSL1	Q96IY1	281 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	HSH2D	Q96JZ2	352 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	ASPN	Q9BXN1	380 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	POLR2J2	Q9GZM3	115 aa	Known RBP	11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	POLR2J3	Q9H1A7	115 aa	Known RBP	11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	GORASP2	Q9H8Y8	452 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	FKRP	Q9H9S5	495 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	UBTD1	Q9HAC8	227 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	ADA2	Q9NZK5	511 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	NDUFAF4	Q9P032	175 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544	NOX1	Q9Y5S8	564 aa		11.95	□□□□□ -0.5
RAB5A-208	ENST00000476544		A0A087WUU8	490 aa		11.94	□□□□□ -0.5
RAB5A-208	ENST00000476544	C11orf98	E9PRG8	122 aa		11.94	□□□□□ -0.5
RAB5A-208	ENST00000476544	NDUFAB1	O14561	156 aa		11.94	□□□□□ -0.5
RAB5A-208	ENST00000476544	HS3ST1	O14792	307 aa		11.94	□□□□□ -0.5
RAB5A-208	ENST00000476544	DCTN3	O75935	186 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms