RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 ERVW-1Q9UQF0 538 aa4.23□□□□□ -1.73
RPSA-205ENST00000475346 RNF24Q9Y225 148 aa4.23□□□□□ -1.73
RPSA-205ENST00000475346 KCNIP3Q9Y2W7 256 aa4.23□□□□□ -1.73
RPSA-205ENST00000475346 C4AP0C0L4 1744 aa4.23□□□□□ -1.73
RPSA-205ENST00000475346 IGHV3OR16-12A0A075B7B8 117 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 E7ESA3 106 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 NTN3O00634 580 aaPredicted RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 BCKDKO14874 412 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 POLR3GO15318 223 aaPredicted RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 GNA14O95837 355 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 LGALS2P05162 132 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 SNHG28P0DPA3 235 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 COX5AP20674 150 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 U2AF2P26368 475 aaKnown RBP eCLIP4.22□□□□□ -1.73
RPSA-205ENST00000475346 STOMP27105 288 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 HOXD10P28358 340 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 OXTRP30559 389 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 EPHX2P34913 555 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 OPRD1P41143 372 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 RFX3P48380 749 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 ARHGDIBP52566 201 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 TMEM50BP56557 158 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 HNRNPA0Q13151 305 aaKnown RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 GRB7Q14451 532 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 ITIH4Q14624 930 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 HNRNPA1L2Q32P51 320 aaKnown RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 VWA2Q5GFL6 755 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 LY6G6FQ5SQ64 297 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 C9orf135Q5VTT2 229 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 RFWD3Q6PCD5 774 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 CCDC137Q6PK04 289 aaKnown RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 CATSPER3Q86XQ3 398 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 NUDCD3Q8IVD9 361 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 MMAAQ8IVH4 418 aaKnown RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 CSNK1A1LQ8N752 337 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 TPRX1Q8N7U7 411 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 OR4A4PQ8NGN8 299 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 TCTEX1D2Q8WW35 142 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 PIBF1Q8WXW3 757 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 TMIGD2Q96BF3 282 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 ZBTB9Q96C00 473 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 ZBED6CLQ96FA7 236 aaPredicted RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 CERS2Q96G23 380 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 C9orf85Q96MD7 179 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 F2RL3Q96RI0 385 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 NODALQ96S42 347 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 TBX15Q96SF7 602 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 HCAR1Q9BXC0 346 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 MRPL37Q9BZE1 423 aaKnown RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 ZNF385DQ9H6B1 395 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 NIPAL2Q9H841 368 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 NUDT15Q9NV35 164 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 THUMPD1Q9NXG2 353 aaKnown RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 TMEM181Q9P2C4 612 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 WARS2Q9UGM6 360 aaKnown RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 ANGPTL2Q9UKU9 493 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 SPATA2Q9UM82 520 aa4.22□□□□□ -1.73
RPSA-205ENST00000475346 BRCA1P38398 1863 aaKnown RBP4.22□□□□□ -1.73
RPSA-205ENST00000475346 CNTNAP2Q9UHC6 1331 aa4.21□□□□□ -1.73
RPSA-205ENST00000475346 CACNA1IQ9P0X4 2223 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 LOC100506127A0A0U1RQW1 187 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 FOXI3A8MTJ6 420 aaPredicted RBP4.21□□□□□ -1.74
RPSA-205ENST00000475346 E9PLD3 99 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 SULT2B1O00204 365 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 HSD17B6O14756 317 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 AIM2O14862 343 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 RAB29O14966 203 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 LATO43561 262 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 C1orf105O95561 183 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 NTN1O95631 604 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 PLEKP08567 350 aaPredicted RBP4.21□□□□□ -1.74
RPSA-205ENST00000475346 UBTFL1P0CB47 393 aaPredicted RBP4.21□□□□□ -1.74
RPSA-205ENST00000475346 IGFBP5P24593 272 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 DCKP27707 260 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 LONP1P36776 959 aaKnown RBP4.21□□□□□ -1.74
RPSA-205ENST00000475346 RAB10P61026 200 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 RPS14P62263 151 aaKnown RBP4.21□□□□□ -1.74
RPSA-205ENST00000475346 XIAPP98170 497 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 SELENBP1Q13228 472 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 KCNJ11Q14654 390 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 SLC10A1Q14973 349 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 ABRAXAS2Q15018 415 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 OXA1LQ15070 435 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 Q3ZCU0 254 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 EIPR1Q53HC9 387 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 CARD16Q5EG05 197 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 OR52W1Q6IF63 320 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 OR52E8Q6IFG1 317 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 SLC16A14Q7RTX9 510 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 MFSD6LQ8IWD5 586 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 CSGALNACT2Q8N6G5 542 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 BEST4Q8NFU0 473 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 MITD1Q8WV92 249 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 HTR3CQ8WXA8 447 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 TAF15Q92804 592 aaKnown RBP eCLIP4.21□□□□□ -1.74
RPSA-205ENST00000475346 ZNF501Q96CX3 271 aaPredicted RBP4.21□□□□□ -1.74
RPSA-205ENST00000475346 OCR1Q9BZK8 76 aa4.21□□□□□ -1.74
RPSA-205ENST00000475346 UPF3AQ9H1J1 476 aaKnown RBP4.21□□□□□ -1.74
RPSA-205ENST00000475346 SMYD3Q9H7B4 428 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms