RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 A0A1W2PRG6 482 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 GJE1A6NN92 205 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 H3BSA7 217 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 NME2P1O60361 137 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 APOL3O95236 402 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 PTHP01270 115 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 LCKP06239 509 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 SP1P08047 785 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 ADRA2AP08913 450 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 CD46P15529 392 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 NME2P22392 152 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 SHC1P29353 583 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 ATP6V1E1P36543 226 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 SLC16A1P53985 500 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 OR2B6P58173 313 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 FOXO1Q12778 655 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 DEFB109BQ30KR1 87 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 TMEM176BQ3YBM2 270 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-210ENST00000475329 SYT6Q5T7P8 510 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-210ENST00000475329 LEG1Q6P5S2 330 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 ADCK1Q86TW2 530 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 CLVS1Q8IUQ0 354 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-210ENST00000475329 NPEPL1Q8NDH3 523 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 ZNF248Q8NDW4 579 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 FAM83FQ8NEG4 500 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-210ENST00000475329 OR9Q1Q8NGQ5 310 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 KISS1RQ969F8 398 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-210ENST00000475329 NMNAT3Q96T66 252 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 MND1Q9BWT6 205 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 HES7Q9BYE0 225 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 OR51V1Q9H2C8 321 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 TXNIPQ9H3M7 391 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 ZNF552Q9H707 407 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-210ENST00000475329 CHCHD3Q9NX63 227 aaKnown RBP12.35□□□□□ -0.43
TRAF4-210ENST00000475329 ERGIC3Q9Y282 383 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 TRAPPC4Q9Y296 219 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 B3GALT5Q9Y2C3 310 aa12.35□□□□□ -0.43
TRAF4-210ENST00000475329 EXOGQ9Y2C4 368 aaKnown RBP12.35□□□□□ -0.43
TRAF4-210ENST00000475329 SPTBN4Q9H254 2564 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 A0A1W2PNR3 127 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 A0A1W2PNV4 684 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 XKRYO14609 159 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 MYL12BO14950 172 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 NOL3O60936 208 aaKnown RBP12.34□□□□□ -0.43
TRAF4-210ENST00000475329 AKR7A3O95154 331 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 PMS2P2O95744 297 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 PLGP00747 810 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-210ENST00000475329 RENP00797 406 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 OPN1LWP04000 364 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 RFPL3SP0C7P2 107 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 DAP3P51398 398 aaKnown RBP12.34□□□□□ -0.43
TRAF4-210ENST00000475329 CCL11P51671 97 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SLC25A1P53007 311 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 B3GALT5-AS1P59052 145 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 RPL27P61353 136 aaKnown RBP12.34□□□□□ -0.43
TRAF4-210ENST00000475329 RAC1P63000 192 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SLC35A1P78382 337 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 ARG2P78540 354 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 POU4F2Q12837 409 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 ACKR1Q16570 336 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 MESTQ5EB52 335 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SLC35D3Q5M8T2 416 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SLC25A25Q6KCM7 469 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 B3GNT6Q6ZMB0 384 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SHFQ7M4L6 423 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 YRDCQ86U90 279 aaKnown RBP12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SULF2Q8IWU5 870 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 ARIH2OSQ8N7S6 290 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SMPDL3BQ92485 455 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 MIB2Q96AX9 1013 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SNX18Q96RF0 628 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 DDOQ99489 341 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 TEAD3Q99594 435 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 SCNM1Q9BWG6 230 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 JAM3Q9BX67 310 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 NMNAT2Q9BZQ4 307 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 RACGAP1Q9H0H5 632 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.34□□□□□ -0.438e-8■■■□□ 17.6
TRAF4-210ENST00000475329 ZNF703Q9H7S9 590 aaPredicted RBP12.34□□□□□ -0.43
TRAF4-210ENST00000475329 TNFRSF10DQ9UBN6 386 aa12.34□□□□□ -0.43
TRAF4-210ENST00000475329 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
TRAF4-210ENST00000475329 ZNF346Q9UL40 294 aaKnown RBP12.34□□□□□ -0.43
TRAF4-210ENST00000475329 OR6C68A6NDL8 312 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 A6NIZ1 184 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 NPIPB13A6NJU9 1138 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 NPIPB4C9JG80 1138 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 NPIPA5E9PKD4 350 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 MS4A18H0YCH9 400 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 KLRC4-KLRK1H3BQV0 150 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 ZNF701M0R085 212 aaPredicted RBP12.33□□□□□ -0.44
TRAF4-210ENST00000475329 SULT2B1O00204 365 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 KLK10O43240 276 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 TRMUO75648 421 aaKnown RBP12.33□□□□□ -0.44
TRAF4-210ENST00000475329 TRAPPC6AO75865 159 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 IGHA1P01876 353 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 GYPBP06028 91 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 CLUP10909 449 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 SPI1P17947 270 aa12.33□□□□□ -0.44
TRAF4-210ENST00000475329 SPINK2P20155 84 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms