RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 C14orf79Q96F83 325 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 USB1Q9BQ65 265 aaKnown RBP14.97□□□□□ -0.01
SCAF11-206ENST00000474828 HDHD5Q9BXW7 423 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 LINC00470Q9BZP3 86 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 TRIM15Q9C019 465 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 C12orf49Q9H741 205 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 HIF3AQ9Y2N7 669 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 GPR52Q9Y2T5 361 aa14.97□□□□□ -0.01
SCAF11-206ENST00000474828 OR6C65A6NJZ3 312 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 C16orf97H3BN30 126 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 KRT36O76013 467 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 DIRAS1O95057 198 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 RAP2AP10114 183 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 POU2F1P14859 743 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 ZNF43P17038 809 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 FUT1P19526 365 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 PTNP21246 168 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 DAZAP2Q15038 168 aaPredicted RBP14.96□□□□□ -0.01
SCAF11-206ENST00000474828 PODNL1Q6PEZ8 512 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 GPAT4Q86UL3 456 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 NRMQ8IXM6 262 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 TMEM123Q8N131 208 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 KDM8Q8N371 416 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 FAM222BQ8WU58 562 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 DACH2Q96NX9 599 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 PRSS50Q9UI38 385 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 TESMINQ9Y4I5 508 aa14.96□□□□□ -0.01
SCAF11-206ENST00000474828 TRBV4-1A0A0J9YWV2 114 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 SH3PXD2BA1X283 911 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 EBAG9O00559 213 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 KPNA4O00629 521 aaPredicted RBP14.95□□□□□ -0.02
SCAF11-206ENST00000474828 PIP5K1CO60331 668 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 GOSR1O95249 250 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 HLA-DOBP13765 273 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 PPP3CBP16298 524 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 MAKP20794 623 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 OMPP47874 163 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 SLC9A3P48764 834 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 ITGADQ13349 1161 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 FLOT2Q14254 428 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 GK3PQ14409 553 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 SEC23BQ15437 767 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 FAM98BQ52LJ0 330 aaKnown RBP14.95□□□□□ -0.02
SCAF11-206ENST00000474828 SFRP5Q5T4F7 317 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 C1QTNF12Q5T7M4 302 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 TSPO2Q5TGU0 170 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 TBPL2Q6SJ96 375 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 AAED1Q7RTV5 226 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 ZNF100Q8IYN0 542 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 POMGNT2Q8NAT1 580 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 OR4C15Q8NGM1 316 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 UTP4Q969X6 686 aaKnown RBP14.95□□□□□ -0.02
SCAF11-206ENST00000474828 DUS3LQ96G46 650 aaKnown RBP14.95□□□□□ -0.02
SCAF11-206ENST00000474828 LRR1Q96L50 414 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 SEPHS2Q99611 448 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 SLC7A10Q9NS82 523 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 TMEM5Q9Y2B1 443 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 V9GYQ6 96 aa14.95□□□□□ -0.02
SCAF11-206ENST00000474828 NOTCH2Q04721 2471 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 FREM1Q5H8C1 2179 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 RPL36A-HNRNPH2H7BZ11 118 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 GADD45GO95257 159 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 IFI30P13284 250 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 COX6B1P14854 86 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 NQO1P15559 274 aaKnown RBP14.94□□□□□ -0.02
SCAF11-206ENST00000474828 CBLP22681 906 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 IGHV1-2P23083 117 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 CHRNB3Q05901 458 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 ZNF730Q6ZMV8 503 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 CCDC121Q6ZUS5 278 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 C22orf34Q6ZV56 151 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 YTHDF3Q7Z739 585 aaKnown RBP14.94□□□□□ -0.02
SCAF11-206ENST00000474828 UEVLDQ8IX04 471 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 C10orf53Q8N6V4 93 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 LRRC75AQ8NAA5 344 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 CANT1Q8WVQ1 401 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 LRGUKQ96M69 825 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 OR2M2Q96R28 347 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 SLCO5A1Q9H2Y9 848 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 CCM2LQ9NUG4 571 aaPredicted RBP14.94□□□□□ -0.02
SCAF11-206ENST00000474828 LYVE1Q9Y5Y7 322 aa14.94□□□□□ -0.02
SCAF11-206ENST00000474828 DHRS12A0PJE2 317 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 TUBAL3A6NHL2 446 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 CENPBD1B2RD01 187 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 CDC42EP2O14613 210 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 PTP4A3O75365 173 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 STAMBPO95630 424 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 ADAP00813 363 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 ADORA3P0DMS8 318 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 EPXP11678 715 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 RRM2P31350 389 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 KIR2DL3P43628 341 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 SELENOPP49908 381 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 RPL18Q07020 188 aaKnown RBP14.93□□□□□ -0.02
SCAF11-206ENST00000474828 STK11Q15831 433 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 ZNF787Q6DD87 383 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 ZNF770Q6IQ21 691 aaPredicted RBP14.93□□□□□ -0.02
SCAF11-206ENST00000474828 CASP12Q6UXS9 341 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 NANOGNBQ7Z5D8 188 aa14.93□□□□□ -0.02
SCAF11-206ENST00000474828 CXorf67Q86X51 503 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms