RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 EMX1Q04741 257 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF91Q05481 1191 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ST3GAL4Q11206 333 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 RAB40BQ12829 278 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 MYBPHQ13203 477 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 GGTLC2Q14390 218 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 POU4F3Q15319 338 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 TBCEQ15813 527 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 BCL2A1Q16548 175 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 MS4A18Q3C1V0 323 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 NADK2Q4G0N4 442 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 KLHL22Q53GT1 634 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SYT6Q5T7P8 510 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 UBE2UQ5VVX9 321 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 NIPAL3Q6P499 406 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 B3GNT6Q6ZMB0 384 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 LRRC69Q6ZNQ3 347 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 TMPPEQ6ZT21 453 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 KCTD8Q6ZWB6 473 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 H1FNTQ75WM6 255 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 MEPCEQ7L2J0 689 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 CXXC5Q7LFL8 322 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 GID4Q8IVV7 300 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SULF2Q8IWU5 870 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ARIH2OSQ8N7S6 290 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SLC37A3Q8NCC5 494 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 FDCSPQ8NFU4 85 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 C9orf43Q8TAL5 461 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF519Q8TB69 540 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SNRNP27Q8WVK2 155 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 FAR1Q8WVX9 515 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 KCNE4Q8WWG9 221 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 KISS1RQ969F8 398 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 MYDGFQ969H8 173 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 MUL1Q969V5 352 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ADGRG7Q96K78 797 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 PIGQQ9BRB3 760 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 RHNO1Q9BSD3 238 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 COPS4Q9BT78 406 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 KATNB1Q9BVA0 655 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 IFT27Q9BW83 186 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 TAPBPLQ9BX59 468 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 NDEL1Q9GZM8 345 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 FAM192AQ9GZU8 254 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF703Q9H7S9 590 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ACKR4Q9NPB9 350 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ACOT13Q9NPJ3 140 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ANKRD10Q9NXR5 420 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 GPR83Q9NYM4 423 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 KLHL13Q9P2N7 655 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 B3GAT1Q9P2W7 334 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ERVK-18Q9QC07 812 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 WARS2Q9UGM6 360 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 IL20RAQ9UHF4 553 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 DIMT1Q9UNQ2 313 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 KLF13Q9Y2Y9 288 aaPredicted RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 PCDHGA9Q9Y5G4 932 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 IER3IP1Q9Y5U9 82 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 LAMA5O15230 3695 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 DOCK10Q96BY6 2186 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 PCNX3Q9H6A9 2034 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 CCDC182A6NF36 153 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 TRIM64BA6NI03 449 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 SLC22A31A6NKX4 558 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 RIIAD1A6NNX1 92 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 SHISA8B8ZZ34 492 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 PTGES3LE9PB15 166 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 PRR23D1E9PI22 279 aaPredicted RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 BLOC1S5-TXNDC5H3BN57 136 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 KLRC4-KLRK1H3BQV0 150 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 M0R082 166 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF701M0R085 212 aaPredicted RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 RRP8O43159 456 aaKnown RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 EIF1BO60739 113 aaKnown RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 MT-ND2P03891 347 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 HIST1H2ABP04908 130 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 STSP08842 583 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 PRR23D2P0DMB1 279 aaPredicted RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 PRKAR1AP10644 381 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 ATP6V1B1P15313 513 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF3P17036 446 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 CCNA2P20248 432 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 EEF1B2P24534 225 aaKnown RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 DCKP27707 260 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 SHC1P29353 583 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 C21orf33P30042 268 aaPredicted RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 EIF2S3P41091 472 aaKnown RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 CDKN2AP42771 156 aaKnown RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 MTNR1AP48039 350 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 NUDT6P53370 316 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 CTXN1P60606 82 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 RPL27P61353 136 aaKnown RBP5.93□□□□□ -1.46
ATG4A-207ENST00000474825 ERVK-25P63136 954 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 PIGFQ07326 219 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 PMS2P3Q13401 168 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 CRMP1Q14194 572 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 MESTQ5EB52 335 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 SLC35D3Q5M8T2 416 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 LINC01590Q5TEZ4 76 aa5.93□□□□□ -1.46
ATG4A-207ENST00000474825 FOXB2Q5VYV0 432 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms