RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 OR2T34Q8NGX1 318 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 OR2L8Q8NGY9 312 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 PYROXD1Q8WU10 500 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 GIMAP1Q8WWP7 306 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 STARD8Q92502 1023 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 FGF14Q92915 247 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 STMN2Q93045 179 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 ASB9Q96DX5 294 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 CMTM7Q96FZ5 175 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 HDHD3Q9BSH5 251 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 LINC00597Q9H2U6 94 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 TPK1Q9H3S4 243 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 AZI2Q9H6S1 392 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 NECAP2Q9NVZ3 263 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 RBAKQ9NYW8 714 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 CGNQ9P2M7 1197 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 CLCF1Q9UBD9 225 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 PCYOX1Q9UHG3 505 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 GNPTGQ9UJJ9 305 aa1.99□□□□□ -2.09
ECHDC1-213ENST00000474240 MAP3K15Q6ZN16 1313 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 C15orf38-AP3S2A0A0A6YYH1 394 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 CLRN2A0PK11 232 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 METTL21EPA6NDL7 271 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 OR5B21A6NL26 309 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 DYNC1I1O14576 645 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 BET1O15155 118 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 MGRN1O60291 552 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 TNFSF13O75888 250 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 FGF1P05230 155 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 SMIM10L1P0DMW3 83 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 TCN1P20061 433 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 SLC2A5P22732 501 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 PAX7P23759 505 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 HMGB2P26583 209 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 OPRD1P41143 372 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 YAP1P46937 504 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 UBE2AP49459 152 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 DUSP3P51452 185 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 UGT2B15P54855 530 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 LINC00315P59091 139 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 HMGCS1Q01581 520 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 FGL1Q08830 312 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 ARHGAP19Q14CB8 494 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 PSG5Q15238 335 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 DUSP7Q16829 419 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 PP632Q6XCG6 107 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 C19orf35Q6ZS72 473 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 PCP2Q8IVA1 136 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 TMEM123Q8N131 208 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 MFSD9Q8NBP5 474 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 ZNF596Q8TC21 504 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 ACER1Q8TDN7 264 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 CD300LFQ8TDQ1 290 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 TIMD4Q96H15 378 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 SMIM10Q96HG1 83 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 TTC25Q96NG3 672 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 CLMPQ9H6B4 373 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 NIPAL2Q9H841 368 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 YY1AP1Q9H869 796 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 CTPS2Q9NRF8 586 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 TRAPPC4Q9Y296 219 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 ATP6V0A2Q9Y487 856 aa1.98□□□□□ -2.09
ECHDC1-213ENST00000474240 RLFQ13129 1914 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 PRRG1O14668 218 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 SS18L1O75177 396 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 UPK3AO75631 287 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 UBTFL1P0CB47 393 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 GKN3PP0CG01 181 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 IGFBP3P17936 291 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 OMGP23515 440 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 CCT3P49368 545 aaKnown RBP1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 CEBPDP49716 269 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 CCR6P51684 374 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 KLHL30Q0D2K2 578 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 PRPSAP1Q14558 356 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 SGCAQ16586 387 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 DGUOKQ16854 277 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 TMEM183BQ1AE95 376 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 DMRTC1Q5HYR2 192 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 ZFP2Q6ZN57 461 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 TMEM135Q86UB9 458 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 TGIF2LXQ8IUE1 241 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 C12orf56Q8IXR9 622 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 TMEM183AQ8IXX5 376 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 FAM133AQ8N9E0 248 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 ACOT4Q8N9L9 421 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 IPMKQ8NFU5 416 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 MAGEE2Q8TD90 523 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 IFT74Q96LB3 600 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 TAAR1Q96RJ0 339 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 COPS8Q99627 209 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 CALYQ9NYX4 217 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 DEC1Q9P2X7 70 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 XCL2Q9UBD3 114 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 CHRNA9Q9UGM1 479 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 ISY1Q9ULR0 285 aaKnown RBP1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 KANK1Q14678 1352 aa1.97□□□□□ -2.09
ECHDC1-213ENST00000474240 NACAE9PAV3 2078 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 TRAV26-1A0A087WT03 109 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 A0A0B4J2A0 478 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms