RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 KDM4DQ6B0I6 523 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 KLHL17Q6TDP4 642 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 ZNF620Q6ZNG0 422 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 LINGO2Q7L985 606 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 TMEM123Q8N131 208 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 SLC43A2Q8N370 569 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 OR51A7Q8NH64 312 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 GIPC3Q8TF64 312 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 NRG4Q8WWG1 115 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 ITLN2Q8WWU7 325 aaPredicted RBP9.19□□□□□ -0.94
CASC3-204ENST00000474190 NMD3Q96D46 503 aaKnown RBP9.19□□□□□ -0.94
CASC3-204ENST00000474190 GMPPAQ96IJ6 420 aaPredicted RBP9.19□□□□□ -0.94
CASC3-204ENST00000474190 GPX7Q96SL4 187 aaPredicted RBP9.19□□□□□ -0.94
CASC3-204ENST00000474190 DDOQ99489 341 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 SF3B5Q9BWJ5 86 aaKnown RBP9.19□□□□□ -0.94
CASC3-204ENST00000474190 TAPBPLQ9BX59 468 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 EGLN3Q9H6Z9 239 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 YY1AP1Q9H869 796 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 GP6Q9HCN6 339 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 TIGARQ9NQ88 270 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 MCTS1Q9ULC4 181 aaKnown RBP9.19□□□□□ -0.94
CASC3-204ENST00000474190 RNF6Q9Y252 685 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 RASD1Q9Y272 281 aa9.19□□□□□ -0.94
CASC3-204ENST00000474190 UNC119BA6NIH7 251 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 SAC3D1A6NKF1 404 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 BHLHE40O14503 412 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 SOCS2O14508 198 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 IMPA2O14732 288 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 CASQ2O14958 399 aaPredicted RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 SYNGR4O95473 234 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 ADAP00813 363 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 IGHMP01871 453 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 F13BP05160 661 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 YES1P07947 543 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 FCGR1AP12314 374 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 POU2F1P14859 743 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 IFNA8P32881 189 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 POLR2IP36954 125 aaKnown RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 SLC9A3P48764 834 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 FOXG1P55316 489 aaPredicted RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 LGALS3BPQ08380 585 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 PMS2P3Q13401 168 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 ZBED5Q49AG3 693 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 PHYHD1Q5SRE7 291 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 HIST2H2BCQ6DN03 193 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 ZNF474Q6S9Z5 364 aaPredicted RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 TFAP2EQ6VUC0 442 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 RASSF6Q6ZTQ3 369 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 ZNF771Q7L3S4 317 aaPredicted RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 FAM214BQ7L5A3 538 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 PXKQ7Z7A4 578 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 IGFN1Q86VF2 1251 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 ATCAYQ86WG3 371 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 OR4Q3Q8NH05 313 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 ZNF519Q8TB69 540 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 GNPDA2Q8TDQ7 276 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 GTPBP3Q969Y2 492 aaKnown RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 TMEM45BQ96B21 275 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 OXGR1Q96P68 337 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 TM9SF2Q99805 663 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 OSBPL10Q9BXB5 764 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 MRPL13Q9BYD1 178 aaKnown RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 NRIP3Q9NQ35 241 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 MED29Q9NX70 200 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 IL20Q9NYY1 176 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 STX18Q9P2W9 335 aaKnown RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 IL20RAQ9UHF4 553 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 FOXD3Q9UJU5 478 aaPredicted RBP9.18□□□□□ -0.94
CASC3-204ENST00000474190 MGAT4BQ9UQ53 548 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 TMEM5Q9Y2B1 443 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 ADAM18Q9Y3Q7 739 aa9.18□□□□□ -0.94
CASC3-204ENST00000474190 MPDZO75970 2070 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 NCOA6Q14686 2063 aaPredicted RBP9.17□□□□□ -0.94
CASC3-204ENST00000474190 IGKV1D-43A0A0B4J1Z2 117 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 A0A1B0GUH1 482 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 NPIPB13A6NJU9 1138 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 NPIPB4C9JG80 1138 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 C11orf98E9PRG8 122 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 BLOC1S5-TXNDC5H3BN57 136 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 ZG16O60844 167 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 VAMP5O95183 116 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 TXNDC12O95881 172 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 IL18BPO95998 194 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 ALPLP05186 524 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 CRHP06850 196 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 ADORA3P0DMS8 318 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 TMIGD3P0DMS9 266 aaPredicted RBP9.17□□□□□ -0.94
CASC3-204ENST00000474190 FCGR2AP12318 317 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 CTSSP25774 331 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 OPRM1P35372 400 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 SELENOPP49908 381 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 RNPS1Q15287 305 aaKnown RBP9.17□□□□□ -0.94
CASC3-204ENST00000474190 ACKR1Q16570 336 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 HIST3H3Q16695 136 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 RFX4Q33E94 735 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 NANOGNBQ7Z5D8 188 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 OAFQ86UD1 273 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 PARP8Q8N3A8 854 aa9.17□□□□□ -0.94
CASC3-204ENST00000474190 LINC00471Q8N535 108 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms