RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 DHDDSQ86SQ9 333 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 TRIM69Q86WT6 500 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 NUDCD3Q8IVD9 361 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 GPR137CQ8N3F9 429 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 MREGQ8N565 214 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 ALLCQ8N6M5 410 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 BBOF1Q8ND07 529 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 OR2A12Q8NGT7 310 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 RHOXF1Q8NHV9 184 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SIGLEC12Q96PQ1 595 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 MAPKAP1Q9BPZ7 522 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SRXN1Q9BYN0 137 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 GPR61Q9BZJ8 451 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 HAUS4Q9H6D7 363 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 NIPAL2Q9H841 368 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 LZTFL1Q9NQ48 299 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 RMND1Q9NWS8 449 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 QPCTLQ9NXS2 382 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 PSMC3IPQ9P2W1 217 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 ERVW-1Q9UQF0 538 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 COMMD3-BMI1R4GMX3 469 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 ABCA6Q8N139 1617 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 MADDQ8WXG6 1647 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 HMGXB3Q12766 1538 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 URB2Q14146 1524 aaKnown RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 ERVK-7P63135 1459 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 CPSF1Q10570 1443 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 CDC42BPBQ9Y5S2 1711 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 FRG2CA6NGY1 282 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 C9JVG2 144 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 PHF1O43189 567 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 VENTXO95231 258 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 YEATS4O95619 227 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 OXSR1O95747 527 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 TBX6O95947 436 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ATP1B2P14415 290 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ETS2P15036 469 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ZP3P21754 424 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 GALP22466 123 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 S100A1P23297 94 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 CMA1P23946 247 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 IFNA8P32881 189 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 HSD17B2P37059 387 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 QARSP47897 775 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 SERPINB8P50452 374 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 P2RY4P51582 365 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 PRRX1P54821 245 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 LIM2P55344 173 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ERVPABLB-1P60509 514 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 GNMTQ14749 295 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 Q1RN00 199 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 LRRC36Q1X8D7 754 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 GSG1Q2KHT4 349 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 SBK1Q52WX2 424 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 PAN3Q58A45 887 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 SPANXN2Q5MJ10 180 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 AGBL2Q5U5Z8 902 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 RAET1LQ5VY80 246 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF772Q68DY9 489 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 THOC7Q6I9Y2 204 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 OR52E8Q6IFG1 317 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 TFAP2EQ6VUC0 442 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 FRA10AC1Q70Z53 315 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 MOB1BQ7L9L4 216 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 APOBEC3FQ8IUX4 373 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 SKA3Q8IX90 412 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 IFT20Q8IY31 132 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 OR2L13Q8N349 312 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 RNF10Q8N5U6 811 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 IFT81Q8WYA0 676 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ARNTL2Q8WYA1 636 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ST8SIA1Q92185 356 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 UFD1Q92890 307 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 C8orf76Q96K31 380 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 C1orf147Q96MC9 270 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 CATSPER2Q96P56 530 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ZIM3Q96PE6 472 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 MTMR9Q96QG7 549 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 SMIM14Q96QK8 99 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 RNF2Q99496 336 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 CGREF1Q99674 301 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 KIR2DL4Q99706 377 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 CENPKQ9BS16 269 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 C19orf24Q9BVV8 132 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 TIPINQ9BVW5 301 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ANKRD19PQ9H560 264 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 EXO5Q9H790 373 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 TMBIM4Q9HC24 238 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ZFP14Q9HCL3 533 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 APOBEC3BQ9UH17 382 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 RPL26L1Q9UNX3 145 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 GPATCH8Q9UKJ3 1502 aaKnown RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 PTPRTO14522 1441 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ZFYVE9O95405 1425 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 TROQ12816 1431 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-212ENST00000473961 NSD3Q9BZ95 1437 aa3.27□□□□□ -1.89
BRCA1-212ENST00000473961 ABCC12Q96J65 1359 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 UNC13BO14795 1591 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 GLI2P10070 1586 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms