RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PINK1Q9BXM7 581 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ULBP3Q9BZM4 244 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 ALG9Q9H6U8 611 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 VPS37BQ9H9H4 285 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 WDR41Q9HAD4 459 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 NRN1Q9NPD7 142 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SMPD3Q9NY59 655 aaPredicted RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 KLHL21Q9UJP4 597 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 IKZF3Q9UKT9 509 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.96□□□□□ -2.1
CALD1-216ENST00000473714 ICAM5Q9UMF0 924 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 FARSAQ9Y285 508 aaKnown RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 MRPS33Q9Y291 106 aaKnown RBP1.96□□□□□ -2.1
CALD1-216ENST00000473714 WDR45Q9Y484 360 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 SPACA6W5XKT8 324 aa1.96□□□□□ -2.1
CALD1-216ENST00000473714 NPIPA5A0A0B4J1W7 369 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 LRIT2A6NDA9 550 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 IGLON5A6NGN9 336 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 MSGN1A6NI15 193 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 C15orf61A6NNL5 157 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 A8MU76 341 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 NPIPA2E9PIF3 369 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 NPIPA5E9PKD4 350 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 SLCO1B7G3V0H7 640 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 H0Y8G0 127 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 H0YL77 283 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CLDN5O00501 218 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 TNFSF12O43508 249 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 LANCL1O43813 399 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 BCAS1O75363 584 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 WBP4O75554 376 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 KRT36O76013 467 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 TM7SF2O76062 418 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 PDE5AO76074 875 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 NDUFA7O95182 113 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 LRATO95237 230 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CLDN9O95484 217 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 ECDO95905 644 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 IGSF6O95976 241 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 GOT2P00505 430 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 IL1BP01584 269 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 IGKV3-20P01619 116 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CD48P09326 243 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CXCL8P10145 99 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 ANXA3P12429 323 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CCDC130P13994 396 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 RPS2P15880 293 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 NCF2P19878 526 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 EDNRAP25101 427 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CYLC1P35663 651 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 MAGEA5P43359 124 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 ZFP36L2P47974 494 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 RGS4P49798 205 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 SGSHP51688 502 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 RIDAP52758 137 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 ACTG1P63261 375 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CYCSP99999 105 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 MFGE8Q08431 387 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 SRSF9Q13242 221 aaKnown RBP eCLIP1.95□□□□□ -2.1
CALD1-216ENST00000473714 KIAA0141Q14154 515 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 FASTKQ14296 549 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 RCN1Q15293 331 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 IMMTQ16891 758 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 HNRNPA1L2Q32P51 320 aaKnown RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 ZNF876PQ49A33 203 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 TMEM225Q6GV28 225 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 PWWP2BQ6NUJ5 590 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 FAM199XQ6PEV8 388 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 CBLN3Q6UW01 205 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 SYT10Q6XYQ8 523 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 C3P1Q6ZMU1 363 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 Q6ZSR9 355 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 PAQR9Q6ZVX9 377 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 UTS2BQ765I0 119 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 NET1Q7Z628 596 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 KIAA1328Q86T90 577 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 NR2C2APQ86WQ0 139 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 HORMAD1Q86X24 394 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CCDC50Q8IVM0 306 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 ARFGAP2Q8N6H7 521 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 BHLHE23Q8NDY6 225 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CATSPER1Q8NEC5 780 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 STXBP6Q8NFX7 210 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 OR1K1Q8NGR3 316 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 OR2T6Q8NHC8 308 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 ZNF519Q8TB69 540 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 SPPL2AQ8TCT8 520 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 HCAR2Q8TDS4 363 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 FAM222BQ8WU58 562 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 SLC5A11Q8WWX8 675 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 RXFP2Q8WXD0 754 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 LHX4Q969G2 390 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 FBXO32Q969P5 355 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 MYLPFQ96A32 169 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 UPRTQ96BW1 309 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 ZBED6CLQ96FA7 236 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 GMPPAQ96IJ6 420 aaPredicted RBP1.95□□□□□ -2.1
CALD1-216ENST00000473714 TPD52L3Q96J77 140 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 CNDP1Q96KN2 507 aa1.95□□□□□ -2.1
CALD1-216ENST00000473714 AGAP4Q96P64 663 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms