RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PHYHIPQ92561 330 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 ELMOD3Q96FG2 381 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 LCORQ96JN0 433 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-207ENST00000473212 LRFN5Q96NI6 719 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 MKKSQ9NPJ1 570 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-207ENST00000473212 RABL2AQ9UBK7 228 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-207ENST00000473212 RABL2BQ9UNT1 228 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 PCDHGA5Q9Y5G8 931 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 BRWD1Q9NSI6 2320 aa19.29■□□□□ 0.68
COL18A1-207ENST00000473212 KIAA1024LP59773 190 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 OTPQ5XKR4 325 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 PWWP2BQ6NUJ5 590 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 C7orf61Q8IZ16 206 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 RCBTB1Q8NDN9 531 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 OR4C3Q8NH37 302 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 RBPMSQ93062 196 aaKnown RBP19.28■□□□□ 0.68
COL18A1-207ENST00000473212 C1QTNF6Q9BXI9 259 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 TAS2R10Q9NYW0 307 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 ANKRD20A5PA0PJZ0 165 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 EPOPA6NHQ4 379 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 ITGA10O75578 1167 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 RGS11O94810 467 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 RPP14O95059 124 aaKnown RBP19.28■□□□□ 0.68
COL18A1-207ENST00000473212 CDK2P24941 298 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 RSC1A1Q92681 617 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 PBX4Q9BYU1 374 aa19.28■□□□□ 0.68
COL18A1-207ENST00000473212 A0A0A6YYC8 382 aaPredicted RBP19.27■□□□□ 0.68
COL18A1-207ENST00000473212 A8MUA0 341 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 I3L1I5 382 aaPredicted RBP19.27■□□□□ 0.68
COL18A1-207ENST00000473212 PSMA6P60900 246 aaKnown RBP19.27■□□□□ 0.68
COL18A1-207ENST00000473212 ADGRG3Q86Y34 549 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 ZNF511Q8NB15 262 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 KLHDC3Q9BQ90 382 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 CPNE7Q9UBL6 633 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 YBX2Q9Y2T7 364 aaKnown RBP19.27■□□□□ 0.68
COL18A1-207ENST00000473212 A0A1B0GTH9 108 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 PLSCR5A0PG75 271 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 ST6GAL1P15907 406 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 BTG2P78543 158 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 ILF3Q12906 894 aaKnown RBP eCLIP19.27■□□□□ 0.68
COL18A1-207ENST00000473212 HTR4Q13639 388 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 DPY19L2P2Q6ZN68 376 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 HDDC2Q7Z4H3 204 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 SPICQ8N5J4 248 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 METTL27Q8N6F8 245 aaPredicted RBP19.27■□□□□ 0.68
COL18A1-207ENST00000473212 MOSPD2Q8NHP6 518 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 RNF166Q96A37 237 aaPredicted RBP19.27■□□□□ 0.68
COL18A1-207ENST00000473212 MRPL48Q96GC5 212 aaKnown RBP19.27■□□□□ 0.68
COL18A1-207ENST00000473212 GABRG3Q99928 467 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 LMAN2LQ9H0V9 348 aa19.27■□□□□ 0.68
COL18A1-207ENST00000473212 L7N2F9 121 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 UBL4AP11441 157 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 IFNGR1P15260 489 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 RPS27P42677 84 aaKnown RBP19.26■□□□□ 0.67
COL18A1-207ENST00000473212 C3P1Q6ZMU1 363 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 MRGPRX1Q96LB2 322 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 FOXS1O43638 330 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 SOX2P48431 317 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 C1orf61Q13536 156 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 NHLRC3Q5JS37 347 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 OLFML2AQ68BL7 652 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 OR5M10Q6IEU7 315 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 NHLRC1Q6VVB1 395 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 GPAT4Q86UL3 456 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 SLC35F3Q8IY50 421 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 EID2Q8N6I1 236 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 AVL9Q8NBF6 648 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 DNAAF1Q8NEP3 725 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 RPS4Y2Q8TD47 263 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 SLC37A2Q8TED4 501 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 THEM6Q8WUY1 208 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 ZNF524Q96C55 264 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 CCDC3Q9BQI4 270 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 TAS2R5Q9NYW4 299 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 SEC16AO15027 2179 aa19.26■□□□□ 0.67
COL18A1-207ENST00000473212 SULT1B1O43704 296 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 CREBL2O60519 120 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-207ENST00000473212 ACSM4P0C7M7 580 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 TMIGD3P0DMS9 266 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-207ENST00000473212 STAC2Q6ZMT1 411 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 SLC22A18ASQ8N1D0 253 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 OR52B4Q8NGK2 314 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 HAVCR1Q96D42 359 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 NMNAT2Q9BZQ4 307 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 TWSG1Q9GZX9 223 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-207ENST00000473212 FBXL3Q9UKT7 428 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 SCML1Q9UN30 329 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 KLHDC2Q9Y2U9 406 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 GIPP09681 153 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-207ENST00000473212 OR8G3PP0DMU2 310 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 CPN1P15169 458 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 DHODHQ02127 395 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 PLA2G7Q13093 441 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 SLC35D3Q5M8T2 416 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 LEG1Q6P5S2 330 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 FAM198BQ6UWH4 519 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 Q6ZSR6 202 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 ZNF550Q7Z398 422 aa19.25■□□□□ 0.67
COL18A1-207ENST00000473212 BPHLQ86WA6 291 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms