RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ZHX1-C8orf76Q96EF9 292 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 PRRC1Q96M27 445 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 WFIKKN1Q96NZ8 548 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 NAA11Q9BSU3 229 aaPredicted RBP11.59□□□□□ -0.55
TPM3-216ENST00000473036 TAPBPLQ9BX59 468 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 DENND2DQ9H6A0 471 aaPredicted RBP11.59□□□□□ -0.55
TPM3-216ENST00000473036 CCM2LQ9NUG4 571 aaPredicted RBP11.59□□□□□ -0.55
TPM3-216ENST00000473036 ARMC1Q9NVT9 282 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 NDUFAF4Q9P032 175 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 FOXD3Q9UJU5 478 aaPredicted RBP11.59□□□□□ -0.55
TPM3-216ENST00000473036 V9GYQ6 96 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 TCRBV5S2A0A599 114 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 POU2F1P14859 743 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 FUT1P19526 365 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 KIR2DL3P43628 341 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 PCYT1AP49585 367 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 POU4F3Q15319 338 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 C5orf46Q6UWT4 87 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 LINGO2Q7L985 606 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 PIWIL3Q7Z3Z3 882 aaKnown RBP11.58□□□□□ -0.56
TPM3-216ENST00000473036 GPAT4Q86UL3 456 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 CXorf67Q86X51 503 aaPredicted RBP11.58□□□□□ -0.56
TPM3-216ENST00000473036 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 PAPD5Q8NDF8 572 aaKnown RBP11.58□□□□□ -0.56
TPM3-216ENST00000473036 OR6S1Q8NH40 331 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 MPP4Q96JB8 637 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 SF3B5Q9BWJ5 86 aaKnown RBP11.58□□□□□ -0.56
TPM3-216ENST00000473036 IL1RAPQ9NPH3 570 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 ELOVL5Q9NYP7 299 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 SELENONQ9NZV5 590 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 NOSIPQ9Y314 301 aaKnown RBP11.58□□□□□ -0.56
TPM3-216ENST00000473036 TESMINQ9Y4I5 508 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 AP4S1Q9Y587 144 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 ENPP4Q9Y6X5 453 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 ROS1P08922 2347 aa11.58□□□□□ -0.56
TPM3-216ENST00000473036 A0A1W2PPR1 153 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 PDLIM1O00151 329 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 PLPP3O14495 311 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 TRAF3IP2O43734 574 aaPredicted RBP11.57□□□□□ -0.56
TPM3-216ENST00000473036 OR2T1O43869 369 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 ZNF432O94892 652 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 CH25HO95992 272 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 ADAP00813 363 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 FABP3P05413 133 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 IGHV1-2P23083 117 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 DNAJA1P31689 397 aaKnown RBP11.57□□□□□ -0.56
TPM3-216ENST00000473036 SELENOPP49908 381 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 TSPO2Q5TGU0 170 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 TTC33Q6PID6 262 aaPredicted RBP11.57□□□□□ -0.56
TPM3-216ENST00000473036 TBPL2Q6SJ96 375 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 H1FNTQ75WM6 255 aaPredicted RBP11.57□□□□□ -0.56
TPM3-216ENST00000473036 OFCC1Q8IZS5 231 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 TMEM239Q8WW34 195 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 TMEM45BQ96B21 275 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 TACO1Q9BSH4 297 aaKnown RBP11.57□□□□□ -0.56
TPM3-216ENST00000473036 FUZQ9BT04 418 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 KLHL4Q9C0H6 718 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 RASSF4Q9H2L5 321 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 DCLRE1BQ9H816 532 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 MRPL39Q9NYK5 338 aaKnown RBP11.57□□□□□ -0.56
TPM3-216ENST00000473036 TAS2R5Q9NYW4 299 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 AURKCQ9UQB9 309 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 RRP15Q9Y3B9 282 aaKnown RBP11.57□□□□□ -0.56
TPM3-216ENST00000473036 CADP27708 2225 aa11.57□□□□□ -0.56
TPM3-216ENST00000473036 TUBAL3A6NHL2 446 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 C16orf97H3BN30 126 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 hCG_2039718K7EN88 272 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 DEAF1O75398 565 aaPredicted RBP11.56□□□□□ -0.56
TPM3-216ENST00000473036 KRT36O76013 467 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 MT-ND1P03886 318 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 ITGA5P08648 1049 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 TSPAN19P0C672 248 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 ASAH2BP0C7U1 165 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 THRBP10828 461 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 EPXP11678 715 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 RHCEP18577 417 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 PSMB1P20618 241 aaKnown RBP11.56□□□□□ -0.56
TPM3-216ENST00000473036 COX5AP20674 150 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 MAKP20794 623 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 LOXP28300 417 aaPredicted RBP11.56□□□□□ -0.56
TPM3-216ENST00000473036 PEX19P40855 299 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 ARHGDIAP52565 204 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 ELF3P78545 371 aaPredicted RBP11.56□□□□□ -0.56
TPM3-216ENST00000473036 RIPK1Q13546 671 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 FHL1Q13642 323 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 CCNIQ14094 377 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 SFRP5Q5T4F7 317 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 TMEM225Q6GV28 225 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 SEZ6L2Q6UXD5 910 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 Q6ZT83 130 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 BEND4Q6ZU67 534 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 KIF18BQ86Y91 864 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 SCAIQ8N9R8 606 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 ADPRHL1Q8NDY3 354 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 PIK3C3Q8NEB9 887 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 CANT1Q8WVQ1 401 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 TXNDC15Q96J42 360 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 OXGR1Q96P68 337 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 SEPHS2Q99611 448 aa11.56□□□□□ -0.56
TPM3-216ENST00000473036 EPYCQ99645 322 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms