RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 NPIPB4C9JG80 1138 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 HNRNPRO43390 633 aaKnown RBP17.72■□□□□ 0.43
SF1-213ENST00000472725 DEAF1O75398 565 aaPredicted RBP17.72■□□□□ 0.43
SF1-213ENST00000472725 FCGR1AP12314 374 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 UQCRC1P31930 480 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 PRPS1P60891 318 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 RPS4XP62701 263 aaKnown RBP17.72■□□□□ 0.43
SF1-213ENST00000472725 SEC23BQ15437 767 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 TFAP2EQ6VUC0 442 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 KIF18BQ86Y91 864 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 ZNF100Q8IYN0 542 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 ZNF610Q8N9Z0 462 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 OR4C15Q8NGM1 316 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 SLCO4A1Q96BD0 722 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 APH1AQ96BI3 265 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 RBM24Q9BX46 236 aaKnown RBP17.72■□□□□ 0.43
SF1-213ENST00000472725 AP4S1Q9Y587 144 aa17.72■□□□□ 0.43
SF1-213ENST00000472725 GCN1Q92616 2671 aaKnown RBP17.72■□□□□ 0.43
SF1-213ENST00000472725 NKX2-6A6NCS4 301 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 GNGT2O14610 69 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 TRAF3IP2O43734 574 aaPredicted RBP17.71■□□□□ 0.43
SF1-213ENST00000472725 OR10H3O60404 316 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 MAKP20794 623 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 AHCYP23526 432 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 LSM11P83369 360 aaKnown RBP eCLIP17.71■□□□□ 0.43
SF1-213ENST00000472725 SORDQ00796 357 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 IL1RL1Q01638 556 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 EXOC3L2Q2M3D2 409 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 C1orf94Q6P1W5 598 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 NHLRC1Q6VVB1 395 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 AAED1Q7RTV5 226 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 LUZP2Q86TE4 346 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 OAFQ86UD1 273 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 POMGNT2Q8NAT1 580 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 ADAD1Q96M93 576 aaKnown RBP17.71■□□□□ 0.43
SF1-213ENST00000472725 ZNF385AQ96PM9 386 aaKnown RBP17.71■□□□□ 0.43
SF1-213ENST00000472725 OPN3Q9H1Y3 402 aaPredicted RBP17.71■□□□□ 0.43
SF1-213ENST00000472725 C12orf49Q9H741 205 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 SLC24A3Q9HC58 644 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 TENM4Q6N022 2769 aa17.71■□□□□ 0.43
SF1-213ENST00000472725 ARRDC5A6NEK1 342 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 BLOC1S5-TXNDC5H3BN57 136 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 KLF4O43474 513 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 RNF13O43567 381 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 CCNB2O95067 398 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 HPRP00739 348 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 FPR3P25089 353 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 DNAJA1P31689 397 aaKnown RBP17.7■□□□□ 0.42
SF1-213ENST00000472725 RPL18Q07020 188 aaKnown RBP17.7■□□□□ 0.42
SF1-213ENST00000472725 P2RY6Q15077 328 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 MICAQ29983 383 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 ZBED5Q49AG3 693 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 FBXW9Q5XUX1 488 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 ZFP1Q6P2D0 407 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 ZNF474Q6S9Z5 364 aaPredicted RBP17.7■□□□□ 0.42
SF1-213ENST00000472725 CASP12Q6UXS9 341 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 Q6ZT83 130 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 HDDC2Q7Z4H3 204 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 ZER1Q7Z7L7 766 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 LSRQ86X29 649 aaPredicted RBP17.7■□□□□ 0.42
SF1-213ENST00000472725 KDM8Q8N371 416 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 GNPDA2Q8TDQ7 276 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 ZNF775Q96BV0 537 aaPredicted RBP17.7■□□□□ 0.42
SF1-213ENST00000472725 FAM46AQ96IP4 442 aaKnown RBP17.7■□□□□ 0.42
SF1-213ENST00000472725 USB1Q9BQ65 265 aaKnown RBP17.7■□□□□ 0.42
SF1-213ENST00000472725 OR10A4Q9H209 315 aa17.7■□□□□ 0.42
SF1-213ENST00000472725 STX18Q9P2W9 335 aaKnown RBP17.7■□□□□ 0.42
SF1-213ENST00000472725 A0A1W2PRG6 482 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 PRSS44E7EML9 344 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 CLOCKO15516 846 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 CLDN1O95832 211 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 CD79BP40259 229 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 GPR4P46093 362 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 ARHGDIAP52565 204 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 CLDN17P56750 224 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 POU3F1Q03052 451 aaPredicted RBP17.69■□□□□ 0.42
SF1-213ENST00000472725 KPNB1Q14974 876 aaKnown RBP17.69■□□□□ 0.42
SF1-213ENST00000472725 ABHD12BQ7Z5M8 362 aaPredicted RBP17.69■□□□□ 0.42
SF1-213ENST00000472725 ACBD4Q8NC06 268 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 NRBF2Q96F24 287 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 HDHD5Q9BXW7 423 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 LINC00470Q9BZP3 86 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 INIPQ9NRY2 104 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 GALNT8Q9NY28 637 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 MALT1Q9UDY8 824 aa17.69■□□□□ 0.42
SF1-213ENST00000472725 CENPBD1B2RD01 187 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 C11orf98E9PRG8 122 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 CDC42EP2O14613 210 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 ZNF432O94892 652 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 POU2F1P14859 743 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 FASP25445 335 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 NTF4P34130 210 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 AQP2P41181 271 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 GSSP48637 474 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 DAP3P51398 398 aaKnown RBP17.68■□□□□ 0.42
SF1-213ENST00000472725 TSPAN31Q12999 210 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 ALG10Q5BKT4 473 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 ZNF770Q6IQ21 691 aaPredicted RBP17.68■□□□□ 0.42
SF1-213ENST00000472725 SLC35D2Q76EJ3 337 aa17.68■□□□□ 0.42
SF1-213ENST00000472725 GABRG1Q8N1C3 465 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms