RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 VPS37AQ8NEZ2 397 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 OR5M1Q8NGP8 315 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 OR5W2Q8NH69 310 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 RAB3IL1Q8TBN0 382 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 FAM110BQ8TC76 370 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ADAMTS15Q8TE58 950 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 DDIT4LQ96D03 193 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 APIPQ96GX9 242 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 SH3YL1Q96HL8 342 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 PPP3R2Q96LZ3 170 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 PSD2Q9BQI7 771 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 THAP7Q9BT49 309 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 ALG8Q9BVK2 526 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 C19orf24Q9BVV8 132 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 NMUR2Q9GZQ4 415 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 RAB1BQ9H0U4 201 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CDC42EP4Q9H3Q1 356 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 PIGUQ9H490 435 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CACYBPQ9HB71 228 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 POLE3Q9NRF9 147 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ZDHHC18Q9NUE0 388 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 NINJ2Q9NZG7 142 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 UPB1Q9UBR1 384 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 PCDHGB4Q9UN71 923 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 B3GALT5Q9Y2C3 310 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 NOSIPQ9Y314 301 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 HDGFL3Q9Y3E1 203 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 DTNAQ9Y4J8 743 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 POLR3HQ9Y535 204 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 DOCK7Q96N67 2140 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 NBEAL1Q6ZS30 2694 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 IGHV4-30-2A0A087WSY4 118 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 A0A096LPI6 279 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SHISA9B4DS77 424 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 B9A039 149 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 AZIN1O14977 448 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SCAMP2O15127 329 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 FRS3O43559 492 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 TRIAP1O43715 76 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 GMFGO60234 142 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 KIAA0513O60268 411 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ENTPD5O75356 428 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 MRPL33O75394 65 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 RAD51DO75771 328 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 URI1O94763 535 aaPredicted RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 VAMP5O95183 116 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 NTN1O95631 604 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 PMS2P2O95744 297 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 PLAUP00749 431 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 HMGN2P05204 90 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 CTAGE8P0CG41 777 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 PRPS1L1P21108 318 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SRP14P37108 136 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 MAP3K8P41279 467 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 NR4A2P43354 598 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 DIO1P49895 249 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 PPOXP50336 477 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 FABP6P51161 128 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 PRPS1P60891 318 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 UBE2NP61088 152 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 RPL38P63173 70 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 SLC35A1P78382 337 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 POU3F1Q03052 451 aaPredicted RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 BTKQ06187 659 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SRSF4Q08170 494 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 LRRC74AQ0VAA2 488 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 FHL3Q13643 280 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 LASP1Q14847 261 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 QPRTQ15274 297 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 DUSP5Q16690 384 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ZSWIM7Q19AV6 140 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 MMEL1Q495T6 779 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 IQCCQ4KMZ1 466 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ATP6AP1LQ52LC2 224 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 KLHL26Q53HC5 615 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 UNC50Q53HI1 259 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 LIPMQ5VYY2 423 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 C11orf71Q6IPW1 123 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SHQ1Q6PI26 577 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 CASP12Q6UXS9 341 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ZYG11AQ6WRX3 759 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 TMPPEQ6ZT21 453 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 C16orf62Q7Z3J2 963 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SLC46A3Q7Z3Q1 461 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 GRINAQ7Z429 371 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SNX32Q86XE0 403 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 CTAGE4Q8IX94 777 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ZNF619Q8N2I2 560 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 TRIML2Q8N7C3 387 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 CCNYL1Q8N7R7 359 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ZNF614Q8N883 585 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 GATSQ8NAP1 163 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 FAM156AQ8NDB6 213 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 OR4F15Q8NGB8 312 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 OR4C3Q8NH37 302 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SGMS2Q8NHU3 365 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ZNF563Q8TA94 476 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 PSMA8Q8TAA3 256 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 C10orf105Q8TEF2 133 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 OR5P2Q8WZ92 322 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms