RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 MT-ND1P03886 318 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 HIST1H2ABP04908 130 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 ASAH2BP0C7U1 165 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 ADORA3P0DMS8 318 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 THRBP10828 461 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 NCK1P16333 377 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 RBM34P42696 430 aaKnown RBP8.03□□□□□ -1.12
SYN3-211ENST00000472027 YAP1P46937 504 aaKnown RBP8.03□□□□□ -1.12
SYN3-211ENST00000472027 ROR2Q01974 943 aaKnown RBP8.03□□□□□ -1.12
SYN3-211ENST00000472027 POU3F1Q03052 451 aaPredicted RBP8.03□□□□□ -1.12
SYN3-211ENST00000472027 BSPH1Q075Z2 132 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 PUDPQ08623 228 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 ST3GAL3Q11203 375 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 ZP4Q12836 540 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 GLYATQ6IB77 296 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 HMBOX1Q6NT76 420 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 ADAM5Q6NVV9 412 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 C20orf204Q6ZNR8 217 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 FKBP9P1Q75LS8 142 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 HIST3H2AQ7L7L0 130 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 PXKQ7Z7A4 578 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 C17orf78Q8N4C9 275 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 RNF148Q8N7C7 305 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 PIK3C3Q8NEB9 887 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 PFN4Q8NHR9 129 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 TMEM255BQ8WV15 326 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 TMEM239Q8WW34 195 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 HIST1H2ACQ93077 130 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 PIGTQ969N2 578 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 FAM162AQ96A26 154 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 BOD1Q96IK1 185 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 HS6ST2Q96MM7 605 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 ALKBH3Q96Q83 286 aaPredicted RBP8.03□□□□□ -1.12
SYN3-211ENST00000472027 ALPK1Q96QP1 1244 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 OR2M2Q96R28 347 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 PIP5K1AQ99755 562 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 EMC6Q9BV81 110 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 C1QTNF6Q9BXI9 259 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 FKRPQ9H9S5 495 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 BEX4Q9NWD9 120 aaPredicted RBP8.03□□□□□ -1.12
SYN3-211ENST00000472027 MED29Q9NX70 200 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 FAM53CQ9NYF3 392 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 EGFL7Q9UHF1 273 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 TAGLN3Q9UI15 199 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 ZNF229Q9UJW7 825 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 AMDHD2Q9Y303 409 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 RNF115Q9Y4L5 304 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 NOX1Q9Y5S8 564 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 SNX13Q9Y5W8 968 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 APCP25054 2843 aa8.03□□□□□ -1.12
SYN3-211ENST00000472027 ITPR2Q14571 2701 aa8.02□□□□□ -1.12
SYN3-211ENST00000472027 SLC35F4A4IF30 521 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 ZNF726A6NNF4 738 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 RPL36A-HNRNPH2H7BZ11 118 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 J3KTA2 159 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 M0R1B8 84 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 HS3ST1O14792 307 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 AKAP8O43823 692 aaKnown RBP8.02□□□□□ -1.13
SYN3-211ENST00000472027 SERPINI2O75830 405 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 FAM107AO95990 144 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 IFNW1P05000 195 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 UMPSP11172 480 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 FUT1P19526 365 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 FUT4P22083 530 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 PTAFRP25105 342 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 HOXC12P31275 282 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 IFNA8P32881 189 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 ZNF83P51522 516 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 UGT2B15P54855 530 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 PRPS1P60891 318 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 SLC25A3Q00325 362 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 HIKESHIQ53FT3 197 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 IFI44LQ53G44 452 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 PHYHD1Q5SRE7 291 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 C1QTNF12Q5T7M4 302 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 GKAP1Q5VSY0 366 aaPredicted RBP8.02□□□□□ -1.13
SYN3-211ENST00000472027 CARD17Q5XLA6 110 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 KLHL17Q6TDP4 642 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 TMEM108Q6UXF1 575 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 SLC46A3Q7Z3Q1 461 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 WDFY1Q8IWB7 410 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 C20orf196Q8IYI0 205 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 PGAM4Q8N0Y7 254 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 TMEM123Q8N131 208 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 GPR137CQ8N3F9 429 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 FITM2Q8N6M3 262 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 ZNF611Q8N823 705 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 ANKK1Q8NFD2 765 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 OR1K1Q8NGR3 316 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 GEMIN6Q8WXD5 167 aaKnown RBP8.02□□□□□ -1.13
SYN3-211ENST00000472027 BCL2L2Q92843 193 aaPredicted RBP8.02□□□□□ -1.13
SYN3-211ENST00000472027 NEUROG1Q92886 237 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 ZNF837Q96EG3 531 aaPredicted RBP8.02□□□□□ -1.13
SYN3-211ENST00000472027 LRR1Q96L50 414 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 PRRC1Q96M27 445 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 CDRT15Q96T59 188 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 CCL19Q99731 98 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 GPR35Q9HC97 309 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 C20orf141Q9NUB4 165 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 RHCGQ9UBD6 479 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms