RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FAM168AQ92567 244 aa7□□□□□ -1.29
USP48-207ENST00000471752 SPDL1Q96EA4 605 aa7□□□□□ -1.29
USP48-207ENST00000471752 BOD1Q96IK1 185 aa7□□□□□ -1.29
USP48-207ENST00000471752 ADAD1Q96M93 576 aaKnown RBP7□□□□□ -1.29
USP48-207ENST00000471752 ZNF75AQ96N20 296 aa7□□□□□ -1.29
USP48-207ENST00000471752 SLC38A2Q96QD8 506 aa7□□□□□ -1.29
USP48-207ENST00000471752 VRK1Q99986 396 aaPredicted RBP7□□□□□ -1.29
USP48-207ENST00000471752 TAPBPLQ9BX59 468 aa7□□□□□ -1.29
USP48-207ENST00000471752 PIF1Q9H611 641 aa7□□□□□ -1.29
USP48-207ENST00000471752 RMND5AQ9H871 391 aa7□□□□□ -1.29
USP48-207ENST00000471752 CRLF2Q9HC73 371 aa7□□□□□ -1.29
USP48-207ENST00000471752 B3GNT2Q9NY97 397 aa7□□□□□ -1.29
USP48-207ENST00000471752 ZNF224Q9NZL3 707 aa7□□□□□ -1.29
USP48-207ENST00000471752 KLHL14Q9P2G3 628 aa7□□□□□ -1.29
USP48-207ENST00000471752 GMPR2Q9P2T1 348 aaKnown RBP7□□□□□ -1.29
USP48-207ENST00000471752 ZNF232Q9UNY5 417 aa7□□□□□ -1.29
USP48-207ENST00000471752 MGAT4BQ9UQ53 548 aa7□□□□□ -1.29
USP48-207ENST00000471752 AMDHD2Q9Y303 409 aa7□□□□□ -1.29
USP48-207ENST00000471752 IGHV2OR16-5A0A0B4J2B6 119 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 ZNF587BE7ETH6 402 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 SLCO1B7G3V0H7 640 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 WNT9BO14905 357 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 FZD7O75084 574 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 SERPINI2O75830 405 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 KRT33AO76009 404 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 MFN2O95140 757 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 AHSA1O95433 338 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 IGLV1-44P01699 117 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 TP53P04637 393 aaPredicted RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 IGFBP5P24593 272 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 SERPINF1P36955 418 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 MRPL19P49406 292 aaKnown RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 IDH3GP51553 393 aaPredicted RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 SEC24CP53992 1094 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 MTPNP58546 118 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 LRRC74AQ0VAA2 488 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 CAMK2DQ13557 499 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 SCARB2Q14108 478 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 GGTLC2Q14390 218 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 TRIP10Q15642 601 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 ETFDHQ16134 617 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 GCNT6Q5T4J0 391 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 AGBL2Q5U5Z8 902 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 REEP3Q6NUK4 255 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 DHRS4L2Q6PKH6 230 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 CLEC2AQ6UVW9 174 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 LINC00114Q6XXX2 140 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 MSANTD1Q6ZTZ1 278 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 H1FNTQ75WM6 255 aaPredicted RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 C20orf196Q8IYI0 205 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 CDK20Q8IZL9 346 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 SVOPLQ8N434 492 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 POMGNT2Q8NAT1 580 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 C1orf162Q8NEQ5 155 aaPredicted RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 BBS10Q8TAM1 723 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 RNF217Q8TC41 542 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 MSI2Q96DH6 328 aaKnown RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 C7orf26Q96N11 449 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 OXGR1Q96P68 337 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 DOK1Q99704 481 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 CPPED1Q9BRF8 314 aaPredicted RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 ZNF385DQ9H6B1 395 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 CA10Q9NS85 328 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 FAIMQ9NVQ4 179 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 CALML5Q9NZT1 146 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 MYEF2Q9P2K5 600 aaKnown RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 CRNNQ9UBG3 495 aaPredicted RBP6.99□□□□□ -1.29
USP48-207ENST00000471752 FZR1Q9UM11 496 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 RASD1Q9Y272 281 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 IFT52Q9Y366 437 aa6.99□□□□□ -1.29
USP48-207ENST00000471752 TRAV36DV7A0A075B6V5 113 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 A0A087WUJ7 227 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 ARPC4-TTLL3A0A0A6YYG9 625 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 A0A0B4J2E0 115 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 A0A1B0GX12 115 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 RNF212BA8MTL3 300 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 C5orf58C9J3I9 102 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 RPL36A-HNRNPH2H7BZ11 118 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 M0QX08 132 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 FBP2O00757 339 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 PLPP3O14495 311 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 TLX2O43763 284 aaPredicted RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 SHOX2O60902 331 aaPredicted RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 SASH3O75995 380 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 VAMP5O95183 116 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 WNT11O96014 354 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 IGKV3-15P01624 115 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 UQCRBP14927 111 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 ETS2P15036 469 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 CBR1P16152 277 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 ZNF43P17038 809 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 GPX2P18283 190 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 TCN1P20061 433 aaPredicted RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 TNFRSF1BP20333 461 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 CD247P20963 164 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 USF1P22415 310 aaPredicted RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 COL8A2P25067 703 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 PRKAR1BP31321 381 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 NR4A2P43354 598 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 ANXA11P50995 505 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms