RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CHI3L1P36222 383 aaPredicted RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 RPL3P39023 403 aaKnown RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 MTNR1AP48039 350 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 GIPRP48546 466 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 RAG2P55895 527 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 KLF3P57682 345 aaPredicted RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 COPZ1P61923 177 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 HNRNPA0Q13151 305 aaKnown RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 PTGR1Q14914 329 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 RAB39AQ14964 217 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 KIAA0040Q15053 153 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 CHI3L2Q15782 390 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 FAM189A2Q15884 450 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 ARHGAP11BQ3KRB8 267 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 EXOSC6Q5RKV6 272 aaKnown RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 TYW3Q6IPR3 259 aaKnown RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 C16orf87Q6PH81 154 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 FIP1L1Q6UN15 594 aaKnown RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 SYT10Q6XYQ8 523 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF813Q6ZN06 617 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 ZCCHC23Q6ZST2 131 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 FRMD7Q6ZUT3 714 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 CLECL1Q8IZS7 167 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 KRTCAP2Q8N6L1 136 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 OR4A15Q8NGL6 344 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 SFXN5Q8TD22 340 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 MAGEE2Q8TD90 523 aaPredicted RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 WFDC12Q8WWY7 111 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 IFT81Q8WYA0 676 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 GTF3AQ92664 365 aaKnown RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 MOAP1Q96BY2 351 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 ROPN1LQ96C74 230 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 ZG16BQ96DA0 208 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 MTERF3Q96E29 417 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF48Q96MX3 618 aaPredicted RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 RBM4BQ9BQ04 359 aaKnown RBP5.86□□□□□ -1.47
HDAC1-204ENST00000471488 DUSP26Q9BV47 211 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 RASSF4Q9H2L5 321 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 MARCH7Q9H992 704 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 SAP30LQ9HAJ7 183 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 MMP26Q9NRE1 261 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 PLEK2Q9NYT0 353 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 SEC14L4Q9UDX3 406 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 TBK1Q9UHD2 729 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 ATP6V1HQ9UI12 483 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 TRIM33Q9UPN9 1127 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 POFUT2Q9Y2G5 429 aa5.86□□□□□ -1.47
HDAC1-204ENST00000471488 A0A087WUV0 522 aaPredicted RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 CFAP73A6NFT4 308 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 C17orf100A8MU93 164 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 TMEM229AB2RXF0 380 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 TMEM233B4DJY2 109 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 C3orf80F5H4A9 247 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 AZIN1O14977 448 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 LSM1O15116 133 aaKnown RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 FOXH1O75593 365 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 AHSA1O95433 338 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 TSPAN15O95858 294 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 PATE4P0C8F1 98 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 GKN3PP0CG01 181 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 OR8G3PP0DMU2 310 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 HOXB1P14653 301 aaPredicted RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 IL7RP16871 459 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 MAKP20794 623 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 RPS5P46782 204 aaKnown RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 EVX1P49640 407 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 ERVS71-1P61550 626 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 RAB1AP62820 205 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 HBA1P69905 142 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 RBBP4Q09028 425 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 CAMK2DQ13557 499 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 C1orf140Q5VVS0 124 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 SAXO2Q658L1 398 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 OLFML2AQ68BL7 652 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 C8orf74Q6P047 294 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 ANKRD46Q86W74 232 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 EPHX4Q8IUS5 362 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 PARP8Q8N3A8 854 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 FNDC5Q8NAU1 212 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 PIK3C3Q8NEB9 887 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 VPS37AQ8NEZ2 397 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 OR52E2Q8NGJ4 325 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 OR4F5Q8NH21 305 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 SYNPRQ8TBG9 265 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 MRAPQ8TCY5 172 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 POP5Q969H6 163 aaKnown RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 CCDC126Q96EE4 140 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 KTI12Q96EK9 354 aaPredicted RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF764Q96H86 408 aaPredicted RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF317Q96PQ6 595 aaPredicted RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 SLC30A2Q9BRI3 323 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 EMC6Q9BV81 110 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF350Q9GZX5 532 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF385DQ9H6B1 395 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 RNF121Q9H920 327 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 CDH20Q9HBT6 801 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 TCF7L1Q9HCS4 588 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 PURGQ9UJV8 347 aaKnown RBP5.85□□□□□ -1.47
HDAC1-204ENST00000471488 RASD1Q9Y272 281 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 TMED5Q9Y3A6 229 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms